>Q13057 (130 residues) QPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPELLQPYT ERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINRFRLEN DLEELALYQI |
Sequence |
20 40 60 80 100 120 | | | | | | QPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPELLQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINRFRLENDLEELALYQI |
Prediction | CCCCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCSSSSSSCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCCCCCCCCCCCSSSSCHHHHHHHHHHHHHHHHCCCCCSSSSSC |
Confidence | 9988886799906067668589999999999649969999857589985378875899999999999999985887643167731567886556873189981767547999999999909996269979 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | QPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPELLQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINRFRLENDLEELALYQI |
Prediction | 8547514200000000301500230043024205420000002241156454542042154015203510563446353414404432133443650300000420372054015205747165140253 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCSSSSCCCCCCCCHHHHHHHHHHHHHCCCSSSSSSCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCCCCCCCCCCCSSSSCHHHHHHHHHHHHHHHHCCCCCSSSSSC QPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPELLQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAINRFRLENDLEELALYQI | |||||||||||||||||||
1 | 3do8A | 0.27 | 0.25 | 7.57 | 1.33 | DEthreader | ------MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARAR-I-RSVLPFAIRAENVKRYVMRKYG-FEPEIVKITNP-YGKTLDVDFEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
2 | 3do8A | 0.28 | 0.25 | 7.78 | 1.83 | SPARKS-K | ------MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARI--RSVLPFAIRAENVKRYVMRKYG-FEPEIVKITNPYGKTLDVD-FEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
3 | 3do8A | 0.28 | 0.25 | 7.78 | 0.50 | MapAlign | ------MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARAR--IRSVLPFAIRAENVKRYVMRKYGFE-PEIVKITNPYGKTLDVD-FEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
4 | 3do8A | 0.28 | 0.25 | 7.78 | 0.62 | CEthreader | ------MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMAR--ARIRSVLPFAIRAENVKRYVMRKY-GFEPEIVKITNPYGKTLDVD-FEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
5 | 3do8A | 0.28 | 0.25 | 7.78 | 1.75 | MUSTER | ------MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARI--RSVLPFAIRAENVKRYVMRK-YGFEPEIVKITNPYGKTLDVD-FEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
6 | 3do8A | 0.28 | 0.25 | 7.77 | 1.69 | HHsearch | -----MKVA-LGGTFEPLHEGHKKLIDVAIKLGR-DITIGVTSDRMAR-AR-IRSVLPFAIRAENVKRYVMR-KYGFEPEIVKITNPYGKTLDVD-FEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
7 | 3do8A | 0.28 | 0.25 | 7.76 | 1.82 | FFAS-3D | --------VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIR--SVLPFAIRAENVKRYVMRK-YGFEPEIVKITNPYGKTLDVD-FEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
8 | 4j75A1 | 0.09 | 0.09 | 3.49 | 0.57 | EigenThreader | SKAHKCFYIYTGRGPSSMHLGHLIPFYFLQEAFNVPLVIQLSDDEKYLFNQNYSLEYINTLTNENVKDIISVGLNPELTFIFKNSFQIAPCFSQCFIPCVPQGIDQDPYFRLSRDIAVKMALHKPVVVHS | |||||||||||||
9 | 3do8A | 0.28 | 0.25 | 7.78 | 1.22 | CNFpred | ------MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARI--RSVLPFAIRAENVKRYVMRKY-GFEPEIVKITNPYGKTLDV-DFEYLVVSPETYEMALKINQKREELGKRKITIVKV | |||||||||||||
10 | 2pidB1 | 0.11 | 0.11 | 3.90 | 1.33 | DEthreader | ELPEFPQTIYCGFDPASLHVGHLLALLGLFHLQAGNVIALVGG-ATARLGRALERVANARALRLGLEALAANHQQWGSFTVLDNSYLQYDFYYLFGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |