Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHSSSSSSSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCHHHHHHHHHHCCCSSCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAVFRSGLLVLTTPLASLAPRLASILTSAARLVNHTLYVHLQPGMSLEGPAQPQSSPVQATFEVLDFITHLYAGADVHRHLDVRILLTNIRTKSTFLPPLPTSVQNLAHPPEVVLTDFQTLDGSQYNPVKQQLVRYATSCYSCCPRLASVLLYSDYGIGEVPVEPLDVPLPSTIRPASPVAGSPK |
1 | 2dumC | 0.08 | 0.06 | 2.53 | 0.75 | CEthreader | | ---MFRKVLFPTDF-SEGAYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDLKKEKLKEEASRKLQEKAEEVKRAFRAKNVRTIIRFGI------PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKT------KKPVLIIKEVDENE------------------------- |
2 | 3kx6A | 0.07 | 0.06 | 2.69 | 0.62 | EigenThreader | | AGARFAKWRAVSIPSNLSILETAHTLARYAAICGLVPIVEPEILADG------DHSIEVCAEVTERVLAAVFKALNDHKVLLALLKPNMVTQGVDCKDKPAALRRTVPPALPGVMFLSGGQ---SESMATRHLNEINKC---NKHPWSLSFSYGRALQSSVLKTWNGSMSNAAAAQDVLMKLAQQ |
3 | 5kdmD | 0.14 | 0.12 | 4.06 | 0.52 | FFAS-3D | | TVRYDYGLIMLGPESSWAQAAVQTALELFSALYPA-------PCISGYARPPGPSA-------VIEHLGSL------VPKGGLLLFLSGLGTGPGMQQFVSSYFLNPACSNVFITVRQRGEKINGRTVLQ--ALGRACDMAGCQHPLGGLNFVNDLASPVSTAEMMDDFSPFFTVEFPPI----- |
4 | 1tikA | 0.12 | 0.11 | 3.84 | 0.64 | SPARKS-K | | ---SLSKVLVLKSSILAGYSQSNQLSDYFVEQWREITVRDLAIPVLDGELRPSDAPLTPRQQEALALSDELIAELKAH---DVIVIAAPARAGVTFRYTENGPEGLVTKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFI---GITDVKFVFAEGIAYGPEAAKAQSDAKAAIDSIVSAE----- |
5 | 3j4qA | 0.11 | 0.06 | 2.33 | 0.63 | CNFpred | | -----NYFLSIPITNKKITAGIKVLQNSILRQDNGSFHITLLVMQL---------LNEDEVNIGTDALLELKPFVEEILGKHLTLPFHGIGTF----------------QGQVGFVKLA------DGDHVSALLEIAETAKRT------------------------------------------ |
6 | 1q7tA | 0.09 | 0.08 | 2.92 | 1.00 | DEthreader | | MSETPRLLFVHAHPD-DESLSNGATIAHYTS-RGAQVHVVTCTLGEEG------ADDQLGGYRIGELTAALRALGV------SAPIYLGGWRRSQRRDADPQTALAIELRPHVVVTY-DPNG--P-VHTHTVTTAAVAAAGDPWT-VPKFYWTVLGLYIVVEADEQARAAKVAAAAHATQV---- |
7 | 4g6cA | 0.05 | 0.04 | 2.12 | 0.79 | MapAlign | | ---LIAVHEGMRRLGELATKVATAVGYILAAELIDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA-GMANCGKHGHGFAEAALPEQDVAPYDWLGLSLAAVIPAHVIYTQVDKRPAGRVWLDILRGKL---GFTGAIFSDDLSMEAAREGGTLTQAADAALAAGCDMVLV-- |
8 | 6d4hA | 0.13 | 0.13 | 4.48 | 0.52 | MUSTER | | EAMFNPQLMIQTPKEEG-TEALLQHLDSALQASRVH--VYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLD-CFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH |
9 | 2pffB | 0.12 | 0.10 | 3.44 | 0.61 | HHsearch | | EGVPSPMLSISNLTQE----QVQDYVNKTNSHLGKQVEISLVNGAKNLV------V-SGPPQSLYGLNLTLRKKAP-SGLDQSRIPFSERKLKFSNRFLPV-------------ASPFHS---HLLVPASDLINKDVKNNVSFNAKDIQIPVYDTFDGSDLRV------LSGSIRLPVKWTTQFK |
10 | 3s3tA | 0.08 | 0.06 | 2.37 | 0.74 | CEthreader | | -NARYTNILVPVDS-SDAAQAAFTEAVNIAQRHQANLTALYVSAYHTPALDPVLSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHT-----IEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHA------PCNVIVIR------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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