>Q12906 (131 residues) PSKMPKKPKNENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEP PQAMNALMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAV KVLQDMGLPTG |
Sequence |
20 40 60 80 100 120 | | | | | | PSKMPKKPKNENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTG |
Prediction | CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCSSSSSCSCCCCCCSSSSSSSSCCSSSSSSCCCHHHHHHHHHHHHHHHHCCCCC |
Confidence | 97555566666730110248998998778766764113444555422110123320368876328999999864898539965408999966999999999999975189999999999999999299999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | PSKMPKKPKNENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTG |
Prediction | 86634754565542733352154654544434432575476555546455345555565345223101302523642535125652364343020202056451504253244023500440077273668 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCSSSSSCSCCCCCCSSSSSSSSCCSSSSSSCCCHHHHHHHHHHHHHHHHCCCCC PSKMPKKPKNENPVDYTVQIPPSTTYAITPMKRPMEEDGEEKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTG | |||||||||||||||||||
1 | 1yykA | 0.19 | 0.12 | 3.95 | 0.83 | DEthreader | EEGDALNF----------------------------------SA-KEG--R--VK--KDYKTILQEITQKR-WKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEE--- | |||||||||||||
2 | 5n8lA1 | 0.24 | 0.15 | 4.77 | 2.53 | SPARKS-K | -----------------------------------------GGSLPSIEQMLAANPGKTPISLLQEYGTRIG--KTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAAEVALKHLKG--- | |||||||||||||
3 | 5n8lA | 0.20 | 0.18 | 5.85 | 0.79 | MapAlign | --YDLLKAEGQAHQPNFTFRVTVGDTSC-----TGQGPSKKAAKHKAAEVALKHLKGCNPVGALQELVVQKGWRL-PEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRV----- | |||||||||||||
4 | 1uhzA | 0.24 | 0.15 | 4.51 | 0.59 | CEthreader | ----------------------------------------------------GSSGSSGPISRLAQIQQARKEKE-PDYILLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKAS | |||||||||||||
5 | 2l3jA | 0.28 | 0.28 | 8.63 | 1.35 | MUSTER | QADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPPPKNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALATVFLLEH | |||||||||||||
6 | 2l3jA | 0.25 | 0.24 | 7.34 | 1.61 | HHsearch | ASEAHLARTLSVNTDFTSDFPDTLGFETEYVGSNGDDDVSLSASPVQIPPPFPPPSGKNPVMILNEL-----RPG-LKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALATVFNLHL | |||||||||||||
7 | 2dmyA | 0.59 | 0.38 | 10.95 | 1.45 | FFAS-3D | -------------------------------------------SSGSSGRKILDSKAIDLMNALMRLNQIRP---GLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTG | |||||||||||||
8 | 1vw45 | 0.18 | 0.18 | 5.73 | 0.88 | EigenThreader | AKYWGIEVETTLKFFNNSLNSKDGIELITGIWAVTEQKDSQAVYRFIDDHIMSRKLFEQPTRELAMLCRREGL-EKPVSKLVAESGRSKSPVFIVHVFSGEELGEGYGSSLKEAKARAATDALMKWYCYEP | |||||||||||||
9 | 2ez6A | 0.19 | 0.10 | 3.20 | 1.42 | CNFpred | ----------------------------------------------------------DYKTILQEITQKRWK-ERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLE---- | |||||||||||||
10 | 6l6jA | 0.07 | 0.07 | 2.80 | 0.83 | DEthreader | MTADHAPPFINPIAARTIDRQD-ADRRELSVPLWVKVGGVLDLI-GAARPSIADIREQNPPLEAAHTLAGYQVSIAIVATGAKWGDEDYYMGQLSEDYLSVERILGAGQ--IAQATYDGRKAGMRYGT--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |