D-I-TASSER Q12794-D1

D-I-TASSER results for Q12794-D1

[Click result.zip to download all results on this page]

Input Sequence in FASTA format

>Q12794 (296 residues)
MAAHLLPICALFLTLLDMAQGFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVA
GFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQ
MYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVV
LWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKAL
LLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

Predicted Secondary Structure

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 \| \| \| \| \| \| \| \| \| \| \| \| \| \| MAAHLLPICALFLTLLDMAQGFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVAGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW
Prediction	CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCSCCSSCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSSCCCCCCCCHHHHHHHHHHHHHHCCCSSSSSCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCCCCCCCSSCCCCCCSSSSCCCCCCSSSSCCCCHHHHHHHHHCSSSSCCCCCCCCCCCCCCCC
Confidence	96328899999998532303678997899961355324168999998689999999886213579876689998899898898489987223464686244214155045121785367899999999999999715899996677763454587755788999999999998199838995252125686887999999860531689999999999969996378806336999964343485432689727998268863699889998773627872489889998876779
	H:Helix; S:Strand; C:Coil

Predicted Solvent Accessibility

Sequence	20 40 60 80 100 120 140 160 180 200 220 240 260 280 \| \| \| \| \| \| \| \| \| \| \| \| \| \| MAAHLLPICALFLTLLDMAQGFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVAGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW
Prediction	63120010000000113314524413136332221122615431562535113501501000000000102424565243604751363044032015302000000103451543730221022002001100433664410000000021333430144520330043037341300000122432634730540350056300100110240043004420564342235455351201030641404335764403033404462154037403010023141640645728
	Values range from 0 (buried residue) to 8 (highly exposed residue)

Predicted Contact, Hydrogen and Distance Map Used in D-I-TASSER simulation

Contact Map

Distance Map

Hydrogen bond networks

D-I-TASSER simulation is guided by the consensus contact map (left figure), distance map (middle figure) and Hydrogen bond network (right figure) derived based on confidence scores of AttentionPotential. In the contact, distance map and hydrogen bond networks, the axes mark the residue index along the sequence. For the contact map, each dot represents a residue pair with predicted contact, while for the distance map and hydrogen bond network, a color scale represents a distance of 1-20+ angstroms or a angle of 0-180 degree.

Top 10 threading templates used by D-I-TASSER

Rank

PDB
hit

ID1

ID2

Cov

Norm.
Zscore

Download
alignment

                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280

                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |

SS
Seq

CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCSCCSSCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSSCCCCCCCCHHHHHHHHHHHHHHCCCSSSSSCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCCCCCCCSSCCCCCCSSSSCCCCCCSSSSCCCCHHHHHHHHHCSSSSCCCCCCCCCCCCCCCC
MAAHLLPICALFLTLLDMAQGFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVAGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

2pe4A

0.94

0.86

24.08

1.33

DEthreader

------------------RS-FRGPLLPNRPFTTVWNANT-WC--RNGQTFRGPDMSGLVGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCE-----

2pe4A

0.99

0.93

26.02

3.21

SPARKS-K

-------------------RSFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVAGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

2pe4A

1.00

0.92

25.73

1.89

MapAlign

---------------------FRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVWGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKS--

2pe4A

0.80

22.62

1.87

CEthreader

NWDTKDIYRQRSRALVQAQHPDWPAPQVEAVAQDQFQGAARAWMAGTLQLGRALRPRGLWGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

2pe4A3

0.99

0.61

17.13

2.06

MUSTER

-------------------RSFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVA--YGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTT--------------------------------------------------------------------------------------------

2pe4A

0.99

0.93

26.02

7.52

HHsearch

-------------------RSFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVAGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

2pe4A

0.99

0.93

25.93

2.63

FFAS-3D

-------------------RSFRGPLLPNRPFTTVWNANTQWCLERHGVDVDVSVFDVVWGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

2pe4A

0.83

0.81

22.77

1.58

EigenThreader

SLIAHLARTFQDILAAI--------PAPDFSGLAVIDWEAARAWMAGTLQLGRALRPRGLGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

2pe4A

0.92

0.81

22.68

3.24

CNFpred

FQGAARAWMAGTLQLGRALR------------------------------------RGLWGFYGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYPSIYMPAVLEGTGKSQMYVQHRVAEAFRVAVAAGDPNLPVLPYVQIFYDTTNHFLPLDELEHSLGESAAQGAAGVVLWVSWENTRTKESCQAIKEYMDTTLGPFILNVTSGALLCSQALCSGHGRCVRRTSHPKALLLLNPASFSIQLTPGGGPLSLRGALSLEDQAQMAVEFKCRCYPGWQAPWCERKSMW

4txgA

0.08

0.07

2.66

0.83

DEthreader

-------------TGNALCVPYYGAEQL-SRRRIIGYFTSWR--SP-Y-DIPWSKLTHINYFAHVDNKGFYSVNADGTVNQAGNAFSDSAVAFLRKY-GFDGVDIDFEYGNWSNRLGSLNKGYVALLQTLRDRLDRAAARYYQITAAVPA------SGYLLRGMET--FQGLKYLDFVNVMSYD--HGAWNRFVGPNAALYDYLNTWAYHYYRGGLPASR-APT-------VGFSLGPLFDVPTAAAGHSSNVG--G-LKGDFNRVSVHYTVGYAIRDEA------PYL-PYLRV-

(a)	ID1 is the number of template residues identical to query divided by number of aligned residues.
(b)	ID2 is the number of template residues identical to query divided by query sequence length.
(c)	Cov is equal the number of aligned template residues divided by query sequence length.
(d)	Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold.
(e)	Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz).
(f)	Template residues identical to query sequence are highlighted in color.

Top 1 final models from D-I-TASSER

Click to view	Rank^a	Download	Estimated TM-score^b
	1	model1.pdb.gz	0.7838

(a)

D-I-TASSER simulations generate a large ensemble of structural conformations, i.e. decoys. These decoys are clustered by SPICKER based on pairwise structure similarity to report up to five final models from the five largest clusters. Models are ranked in descending order of cluster size. If the simulations converge well, it is possible to have less than 5 models generated, which is usually an indication of good model quality.

(b)

The model confidence is quantitatified by estimated TM-score (eTM-score), calculated based on significance of threading template alignments, contact map satisfaction rate, mean absolute error between distance of model and distance of AttentionPotential, and convergence of D-I-TASSER simulations. eTM-score is typically in the range of [0, 1], with higher eTM-score signifies higher model confidence.

Proteins with similar structure

Top 10 structural analogs in PDB (as identified by TM-align)

Rank	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov.	Download Alignment
1	2pe4A	0.93	0.63	0.978	0.936	model1_2pe4A.pdb.gz
2	2atmA	0.57	1.76	0.287	0.612	model1_2atmA.pdb.gz
3	1fcvA	0.56	2.18	0.311	0.608	model1_1fcvA.pdb.gz
4	5ta0A	0.55	5.00	0.038	0.774	model1_5ta0A.pdb.gz
5	3og2A	0.54	4.80	0.044	0.757	model1_3og2A.pdb.gz
6	4aw7A	0.54	4.96	0.065	0.760	model1_4aw7A.pdb.gz
7	1vffA	0.43	5.22	0.080	0.628	model1_1vffA.pdb.gz
8	2innA	0.38	6.80	0.047	0.676	model1_2innA.pdb.gz
9	1dosA	0.37	4.75	0.040	0.527	model1_1dosA.pdb.gz
10	3d3aA1	0.36	4.82	0.056	0.503	model1_3d3aA1.pdb.gz

(a)	Query structure is shown in cartoon, while the structural analog is displayed using backbone trace.
(b)	Ranking of proteins is based on TM-score of the structural alignment between the query structure and known structures in the PDB library.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov. represents the coverage of the alignment by TM-align and is equal to the number of structurally aligned residues divided by length of the query protein.

Predicted Gene Ontology (GO) Terms

Molecular Function (MF)

GO term	Cscore^GO	Name
GO:0003824	1.00	catalytic activity
GO:0015929	0.97	hexosaminidase activity
GO:0004415	0.96	hyalurononglucosaminidase activity
GO:0004872	0.89	receptor activity
GO:0001618	0.88	virus receptor activity
GO:0016758	0.59	transferase activity, transferring hexosyl groups
GO:0008194	0.59	UDP-glycosyltransferase activity
GO:0050501	0.54	hyaluronan synthase activity
GO:0008134	0.54	transcription factor binding

Download full result of the above consensus prediction.

Click the graph to show a high resolution version.

(a)

Cscore^GO is the confidence score of predicted GO terms. Cscore^GO values range in between [0-1]; where a higher value indicates a better confidence in predicting the function using the template.

(b)

The graph shows the predicted terms within the Gene Ontology hierachy for Molecular Function. Confidently predicted terms are color coded by Cscore^GO:

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

Biological Process (BP)

GO term	Cscore^GO	Name
GO:0071704	0.95	organic substance metabolic process
GO:0043170	0.94	macromolecule metabolic process
GO:0030203	0.93	glycosaminoglycan metabolic process
GO:0009987	0.91	cellular process
GO:0009057	0.91	macromolecule catabolic process
GO:1903510	0.90	mucopolysaccharide metabolic process
GO:0051704	0.90	multi-organism process
GO:0006027	0.90	glycosaminoglycan catabolic process
GO:0071345	0.87	cellular response to cytokine stimulus
GO:0070555	0.87	response to interleukin-1
GO:0051707	0.87	response to other organism
GO:0034644	0.87	cellular response to UV
GO:0016032	0.87	viral process
GO:0010224	0.87	response to UV-B
GO:0006950	0.87	response to stress
GO:0048856	0.86	anatomical structure development
GO:0030212	0.86	hyaluronan metabolic process
GO:0071493	0.85	cellular response to UV-B
GO:0071347	0.85	cellular response to interleukin-1
GO:0009615	0.85	response to virus
GO:1901700	0.84	response to oxygen-containing compound
GO:0071495	0.84	cellular response to endogenous stimulus
GO:0071363	0.84	cellular response to growth factor stimulus
GO:0051240	0.84	positive regulation of multicellular organismal process
GO:0051216	0.84	cartilage development
GO:0048523	0.84	negative regulation of cellular process
GO:0048522	0.84	positive regulation of cellular process
GO:0045926	0.84	negative regulation of growth
GO:0030334	0.84	regulation of cell migration
GO:0030214	0.84	hyaluronan catabolic process
GO:0006979	0.84	response to oxidative stress
GO:0001558	0.84	regulation of cell growth
GO:0030308	0.82	negative regulation of cell growth
GO:0000302	0.82	response to reactive oxygen species
GO:0006952	0.62	defense response
GO:1904018	0.58	positive regulation of vasculature development
GO:1900104	0.58	regulation of hyaluranon cable assembly
GO:0051130	0.58	positive regulation of cellular component organization
GO:0050678	0.58	regulation of epithelial cell proliferation
GO:0045927	0.58	positive regulation of growth
GO:0045765	0.58	regulation of angiogenesis
GO:0044089	0.58	positive regulation of cellular component biogenesis
GO:0036119	0.58	response to platelet-derived growth factor
GO:0030335	0.58	positive regulation of cell migration
GO:0030155	0.58	regulation of cell adhesion
GO:0010632	0.58	regulation of epithelial cell migration
GO:0009268	0.58	response to pH
GO:0008284	0.58	positive regulation of cell proliferation
GO:0006024	0.58	glycosaminoglycan biosynthetic process
GO:0046677	0.56	response to antibiotic
GO:0006954	0.56	inflammatory response
GO:1900106	0.53	positive regulation of hyaluranon cable assembly
GO:0071467	0.53	cellular response to pH
GO:0050679	0.53	positive regulation of epithelial cell proliferation
GO:0045785	0.53	positive regulation of cell adhesion
GO:0045766	0.53	positive regulation of angiogenesis
GO:0036120	0.53	cellular response to platelet-derived growth factor stimulus
GO:0030307	0.53	positive regulation of cell growth
GO:0030213	0.53	hyaluronan biosynthetic process
GO:0010634	0.53	positive regulation of epithelial cell migration

Download full result of the above consensus prediction.

Click the graph to show a high resolution version.

(a)

Cscore^GO is the confidence score of predicted GO terms. Cscore^GO values range in between [0-1]; where a higher value indicates a better confidence in predicting the function using the template.

(b)

The graph shows the predicted terms within the Gene Ontology hierachy for Biological Process. Confidently predicted terms are color coded by Cscore^GO:

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

Cellular Component (CC)

GO term	Cscore^GO	Name
GO:0044464	0.98	cell part
GO:0044444	0.96	cytoplasmic part
GO:0043231	0.95	intracellular membrane-bounded organelle
GO:0031410	0.95	cytoplasmic vesicle
GO:0005773	0.92	vacuole
GO:0005764	0.91	lysosome
GO:0005737	0.61	cytoplasm
GO:0044421	0.58	extracellular region part
GO:0036117	0.57	hyaluranon cable
GO:0005615	0.57	extracellular space

Download full result of the above consensus prediction.

Click the graph to show a high resolution version.

(a)

Cscore^GO is the confidence score of predicted GO terms. Cscore^GO values range in between [0-1]; where a higher value indicates a better confidence in predicting the function using the template.

(b)

The graph shows the predicted terms within the Gene Ontology hierachy for Cellular Component. Confidently predicted terms are color coded by Cscore^GO:

[0.4,0.5)

[0.5,0.6)

[0.6,0.7)

[0.7,0.8)

[0.8,0.9)

[0.9,1.0]

Predicted Enzyme Commission (EC) Numbers

Top 5 enzyme homologs in PDB

Rank	Cscore^EC	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov.	EC Number	Predicted Active Site Residues
1	0.060	2pe4A	0.928	0.63	0.978	0.936	3.2.1.35	NA
2	0.060	1wzaA	0.483	4.71	0.037	0.672	3.2.1.1	NA
3	0.060	2bfgA	0.489	5.02	0.056	0.710	3.2.1.37	NA
4	0.060	1d7fA	0.514	5.22	0.060	0.757	2.4.1.19	NA
5	0.060	1b1yA	0.480	4.44	0.048	0.655	3.2.1.2	50,186

	Click on the radio buttons to visualize predicted active site residues.
(a)	Cscore^EC is the confidence score for the Enzyme Commission (EC) number prediction. Cscore^EC values range in between [0-1]; where a higher score indicates a more reliable EC number prediction.
(b)	TM-score is a measure of global structural similarity between query and template protein.
(c)	RMSD^a is the RMSD between residues that are structurally aligned by TM-align.
(d)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(e)	Cov. represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

Predicted Ligand Binding Sites

Template proteins with similar binding site:

Rank	Cscore^LB	PDB Hit	TM-score	RMSD^a	IDEN^a	Cov.	BS-score	Lig. Name	Download Complex	Predicted binding site residues
1	0.01	1v3mA	0.517	5.15	0.070	0.753	0.48	GAL	complex1.pdb.gz	175,176,177,178,228
2	0.01	1v3mB	0.517	5.10	0.070	0.750	0.45	GAL	complex2.pdb.gz	172,178,209,212
3	0.01	1cdgA	0.515	5.04	0.053	0.740	0.54	MAL	complex3.pdb.gz	175,176,177,178,179,220,221,230

	Click on the radio buttons to visualize predicted binding site and residues.
(a)	Cscore^LB is the confidence score of predicted binding site. Cscore^LB values range in between [0-1]; where a higher score indicates a more reliable ligand-binding site prediction.
(b)	BS-score is a measure of local similarity (sequence & structure) between template binding site and predicted binding site in the query structure. Based on large scale benchmarking analysis, we have observed that a BS-score >1 reflects a significant local match between the predicted and template binding site.
(c)	TM-score is a measure of global structural similarity between query and template protein.
(d)	RMSD^a the RMSD between residues that are structurally aligned by TM-align.
(e)	IDEN^a is the percentage sequence identity in the structurally aligned region.
(f)	Cov. represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein.

[Click result.zip to download all results on this page]

References:
1.	Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020.