Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCSCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCC FESGSGGWFDWMMPTLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNLQTCLAVLGRALPTSRLDLACSLSWNVIRYSLQKLRLVRWLLKKVFQCRRATPATEDPIAQVHQAFCKNLLERAIESLVKPQAKKKAGDQEEESCEFSSALEYLKLLHSFVDSVGVMSPPLSRSSVLKSALGPDIICRWWTSAITVAISWLQGDDAAVRSHFTKVERIPKALEVTESPLVKAIFHACRAMHASLPG |
1 | 4a1sA | 0.11 | 0.10 | 3.48 | 0.79 | CEthreader | | ---------GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTELRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVM------GRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLG------------------DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG---DRAAERRANSNLGNSHIFLG |
2 | 6yj6A2 | 0.07 | 0.06 | 2.61 | 0.80 | EigenThreader | | DAERERIERERRITAKVVDKYEKMKKSELVDIFSSVKNFTELDFQIERLSKMMKFVKLAIVLQMDDEEELAENLRGLLNQFQFNRKVLQVFMYSLLNILSQQKFFLRQLKAFDSCRYNEVYNPNKKSSPYLYYIYAVLLYSVNLLMGLSHIHRAM----QRLTAQRHFQIFHGLRYLYRYHKIRKSLY----------------TDLE--KQEADYNLGRAFHLIGLVSIAIEYYNRVLENYD----DGKL-KKHAAYNSIIIYQQSGN |
3 | 4y6cA | 0.11 | 0.08 | 2.81 | 0.78 | FFAS-3D | | -------------------------------------------HPSRLRSQ---HELARRYQQNGQVQEAVELLEQVVAIQAKTLRSEHPSRLASQHELARAYAQEAVELLEQVVAIQAKTLRSEHPSRLASQHELARAAVELLEQVVAIQA-----------KTLRSEHPSRLASQHELARAYANGQVQEAVELLEQVVAIQAKTLSRLASQHELARA--YQANGQRQEAQELLEQ---------------------VRAIQAKTQ-R |
4 | 6w2rA | 0.13 | 0.10 | 3.35 | 0.77 | SPARKS-K | | -----------------------------------------GTTEDERRELEKVARKAIEAAREGNTDEVREQLQRALEIARESGTKTAVKLALDVALRVAQEAAKR---------------GNKDAIDEAAEVVVRIAEEDALEQALRVLEEVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKRTGTP-------------DVIKLAIKLAKLAARAALEVIKRPNEALKKIVKAIQEAVESLREAEEKREKARERVREAVERAEEV |
5 | 5a6cA | 0.12 | 0.09 | 3.18 | 0.95 | CNFpred | | ------------LSAIYSQLGNAYFALEYHHHDLTLAR-----IGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRDKVGEARALYNLGNVYHAKGKVRDALQAAVDFYEENLSLVTAL-------DRAAQGRAFGNLGNTHYLLG----------------NFRDAVIAHEQRLLIAKEF------------------GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL---KDRAVEAQSCYSLGNTYTLLQ |
6 | 5u1sA | 0.08 | 0.06 | 2.33 | 0.83 | DEthreader | | ----------------------------------------PHLEPNKIYLNSFYLSYSMLYD--GL-DK--IMLLDILS--YEETTEVQRAIKSDLVILEAIIRQFDCVCKRLSNIISFERLKEKIH----STAKIEQALLHASSLIN--VHLWD----------S--DLTAFQIYFGKLPPELFDINNDH---------NLPLYIVILLNIKIFNESAKLNIKAGNVISAVIDCRKAQNLALLLKLRLALKSSFSFFQLIKIHIRIGF |
7 | 6mfvA1 | 0.08 | 0.06 | 2.46 | 0.82 | MapAlign | | ------------EFFKCEIYSWLADAYMLEKAERYLKKTKEIVINDMYAWFSYYAEKTKYEYYKENSREALKSALKELEII-RKIGDPEKEGLVLLHVGDIYLKGISYYQEALKMAK--------------AYGIKFLEHISYMELAKGYYQLK--------------LYEKASEYSEKAANYFL------------------MIRNYRRATDAMAYGSVSYIATKNLEKAEKFAKEMIRIAQST------DY-PLAWAGYIFLAAVDF |
8 | 3ceqB | 0.14 | 0.12 | 4.19 | 0.53 | MUSTER | | SGHDHPDVATMLNILALVYRDQYKEAAHLLNDALAIREKTLGKDH--PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQ-YQDAETLYKERAHEKEFGSVNGDNKPIWMHAEEREESK----DKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR--------------------------- |
9 | 1vt4I3 | 0.16 | 0.09 | 2.86 | 0.55 | HHsearch | | ---------EYALHRSIVDHYNI-------PKTF-DSDDLIPPYLD--QYFYSHI-------------------GHHLKNIEH------PERMTLFVFLDFRFLEQKI----------RHDSTAWNASGSILNTL-QQLKFY------KPYICDNDPK----------YERLVNAILDFLPKIEEN----------------LICSKY-----TDLLRIA---LMAEDE-------------------------A--IFEEAHKQVQRG |
10 | 3ulqA | 0.08 | 0.07 | 2.75 | 0.79 | CEthreader | | KQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKA--------YSMAEAEKQPQLMGRTLYNIGLCKNSQ--------------SQYEDAIPYFKRAIAVFEESN------------------ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAG---DVIYLSEFEFLKSLYLSGPD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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