Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCSSSCC MDDSGELGGLETMETLTELGDELTLGDIDEMLQFVSNQVGEFPDLFSEQLCSSFPGSGGSGSSSGSSGSSSSSSNGRGSSSGAVDPSVQRSFTQVTLPSFSPSAASPQAPTLQVKVSPTSVPTTPRATPILQPRPQPQPQPQTQLQQQTVMITPTFSTTPQTRIIQQPLIYQNAATSFQVLQPQVQSLVTSSQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLAPATVQTVAAPQVQQVPVLVQPQIIKTDSLVLTTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVGSSGTILTTMPVMMGQEKVPIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQKNKLLKGIDLGSLVDNEVDLKIEDFNQNVLLMSPPASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLCLSFNPLTSLLQWGGAHDSDQHPHSGSGRSVLSSGAELAGFQRDLGSLRRLAHSFRPAYRKVFLHEATVRLMAGASPTRTHQLLEHSLRRRTTQSTKHGEVDAWPGQRERATAILLACRHLPLSFLSSPGQRAVLLAEAARTLEKVGDRRSCNDCQQMIVKLGGGTAIAAS |
1 | 1vt4I3 | 0.07 | 0.06 | 2.36 | 1.11 | CEthreader | | --------------------------------------------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 4i2wA | 0.07 | 0.06 | 2.64 | 1.22 | EigenThreader | | KLAFRGEAKDTEQKTALNNLLVLCRESESGATGVWNQGALVPFVLNLINDASENEEVTVTAIRILDETIKNSVRCKFLAHDPDGPKSVRFVCRLCKKSTKDFVDATGILVQRVFNAAKDRQKEKPDPEVAEANELQELQDPKVGAVQRETCIDLFLKNLHDGGIPRGWSWKFVEERGLLALLDVASQIPELCEYPVSAETRQHVAICLQRLEEDVFDTKRTIFKEKVD-----FFNALISR--CTNDDEGHKYRIKLSCFLITLQGLITNDQLTPILEAASQDHLQGIAAELIVATLRALYDS----EDPTVKVRALVGLCKIGAEEAVI-----SLAKTCKKFLLETEK--------YSVDIRRYACEGLSYLDVKEWIVDDSLLLKALVLLAKKAGALCVYTLATIYANLSNAFEKPKFRVRALVEEGAVPACVAVSKTESKNALELIARSLLAFAEYEDLRGRIIAEG-------GTVLCLRLTKEAGKIKAGHAIAKLGAKADPISFVKPLCDLLHPDVEGKANYDSLLTLTNLASIRGRILKEPKIEHLRAAAAELLLNLLFFEKFYEE-------------TVAPGTDRLKLWVLYSAE---VEEER----LSRASAAGFAILTENACARISWPEVFKDIAHTQRRGLGIANIHS |
3 | 1vt4I3 | 0.07 | 0.05 | 2.23 | 1.82 | MapAlign | | -LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH--------------------------------------------------------------------------HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGG---------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 1r05A | 0.29 | 0.04 | 1.15 | 1.97 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGKASRAQILDKATEYIQYMRRKVHTLQQDIDDLK---RQNALLEQQVRALEGSGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1gjqA | 0.06 | 0.05 | 2.25 | 0.95 | CEthreader | | ---------------------------------------------------------------DMKAAEQYQGAASAVDPAHVVRTNGAPDMSESEFNEAKQIYFQRCAGCHGVLRKGATGKPLTPDITQQRGQQYLEALITYGTPLGMPNWGSSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI-------DNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA-------------WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSS--------------------ALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQHDVY----------------- |
6 | 7cunD | 0.07 | 0.07 | 2.64 | 1.20 | EigenThreader | | VEAESVEGVVRILLEHYYKENDPSVRLKIASLLGLLSKTAGFSPDCIMDDAINILQNEKSHQVLAQLLDTLLAIGTKLPENQAIQMRLVDVACKHLTDTSHGVRNKCLQLLGNLGSLEKVQKIIGDYFSDQD------------------------PRVRTAAIKAMLQLHERGLKLHQTIYNQACKLLSDDYEQV-----RSAAVQLIWVVSQLYPESIMVSDGS-----WVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSGACGAFVHGLEDEMYEVRIAAVE----ALCMLAQSSPSFAEKCLDFLVDMFNDEIEEVRLQSIHTMRKISNNTVLAVLEDSSRDIREALHELLCCTLKNLTKYPTDRDSIWKCLKFLGSRHPTLVLPLVPELLPDMDDPAYIAVLVLIFNAAKT----CPTMPALFSDLRDSLSHLVPALRLPGRKLDPSQQFLQQSLERVYSLDFSATYLRCQLLLIKALQEKLWNVAAPLYLKQSDL----ASAAAKQIMEETYKMEFMVVIIHHMRLQAKALQLIVTARTTRGLDPLFGMCEKFLQEVDFFQRYFLPHLQDSFVDKLLDLMPRLMTSKPAEVVKILQTMLR-----------------------------QSAFLHLP |
7 | 6g1lA | 0.33 | 0.04 | 1.14 | 0.81 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKPDMRWNKGTILKASVDYIRKLQREQQRAKDLENRQKKLEHAN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 5yfpE | 0.07 | 0.07 | 2.77 | 0.96 | SPARKS-K | | --------------SLYELDPK-----WKKLL-----KTDNFLGGLTVNEFVQELS--KDHRNDVLIDANTKNLPTNEKDQDAIREAIWKQLDPKPYIRTFESTLKELKNLNEETLNKRQYFSEVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVLETAIKKKQNYIQSVELIRRYNDFYSMGKSDIVEQLR--LSKNWKLNLKSVKLMKNLLILSSKLETSSIPKTINSAYRENFTKLNEIAIILNNFN-GGVNVIQSFINQHDYFIFIKNVKFKEQLIDFENHSVI---------IETSMQINDVETSKIVKRVFEEKATHVIQLFIQRVFAQKIEP----RFEVLLRNSLSISNLAYVRILHGLFTLFGKFTKSLIDYFQLSNQSTTLEQCFADLFSHYLYDRSKYFGEAILVDMTSKFT--VNYDKEINKRVLLDKYKEKLSTNTASDIDNSPNSPANYSLNDVDSMLKCVVESTARVMELIILKIMFLGIVDSYMEIALEVAYWKICKVDINKTAGVVNLNFLKFISMSTEILDLLSISIKSIFLPLLNNSPEIKAQIIEMTILCKQKKKDFVPKSQELLDQDTLPAIEIVNILNLIFEQSSKFQTFLTLIGEELYGLLLSHYSHFQVKDIIGYQTAIEDWGVASLI |
9 | 5u71A | 0.13 | 0.05 | 1.67 | 0.91 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKILHHKMLHSVLQAPMSTLNTL--------KAGGILNRFSKDIAILDLPLTIFDFIQLLLIVIGAIAVVAVLQPYIFVATVPVIVAFIMLRAYFLQTSQQLKQLESE--------------------------------------RSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNL-----------TANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILT-----------------------------TGEGEGRVGIILTLAMNIMTLQWAVNSSIDVDSLMRSVSRVFKFIDMP-QMTVKDLTAKYEGGNAILEN |
10 | 6wmuC | 0.06 | 0.03 | 1.22 | 0.50 | DEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------I--ELVPERLRGADIEVYVEKGRR-ITARHI--R----QLEKDDVKLIEKVVAKDYIGELICAAPTNDLSLVYRAAESNFSYDLSAVIRSVGEM--AENQFRVGLVRVER-INAKPISAAVKEFFGSSQLSQFMDQPE---KRRISALGPGGLTRERAGF------------------PEGPNIGLIN--SL--SV-YAQ---------T-NEYGFLE-------------------------------------------------------------------------------------------------------MGANMQRQAVERAVAVDSGVTAVAKRGGVVI--NEDEMY--GIDIYNLTK----PCVSLGVLADGPSTDLGELALGQNMRVAF-PYNFEDSILVSERVVQEDR------------------------GRH-NGIKNIEDMPYDNGTPVHGMAAKGIGALAKEAIKLLPTSGQIRLYDGEQFPVT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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