Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCHHHHHCCCCCCCCCCCCCSSSSSSSCCSSSSCCHHHSSCCCSSSSSCCCCSCCSSSSSSCCCCCSSSCCCCSCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCSSSSSSCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCSSCCCCHHHHCCCCCCHHHHHHHHCCCC MDLKEKHLGEPPSALGLSTRKALSVLKEQLEAVLEGHLRERKKCLTALRPGQESFASLRGIKDDEHIVLEPGDLFPPFSPPPSPRGEVERGPQSPQQHRLFRVLETPVIDNIRWCLDMALSRPVTALDNERFTVQSVMLHYAVPVVLAGFLITNALRFIFSAPGVTSWQYTLLQLQVNGVLPILPLLFPVLWVLATACGEARVLAQMSKASPSSLLAKFSEDTLSSYTEAVSSQEMLRCIWGHFLRVLGGTSPTLSHSSSLLHSLGSVTVLCCVDKQGILSWPNPSPETVLFFSGKVEPPHSSHEDLTDGLSTRSFCHPEPHERDALLAGSLNNTLHLSNEQERGDWPGEAPKPPEPYSHHKAHGRSKHPSGSNVSFSRDTEGGEEEPSKTQPGMESDPYEAEDFVCDYHLEMLSLSQDQQNPSCIQFDDSNWQLHLTSLKPLGLNVLLNLCDA |
1 | 6lcpA | 0.07 | 0.06 | 2.40 | 1.18 | MapAlign | | PIFGGVNPGLNSVPLIVIITVTAIKDAIEDYRRTILDIELNNDDELDIIILATGACYVETKNLDGETLKVRQARTLKGAIRWKEPREMSEPIGIDNLLLGCHLRNTTGHDTKIMMNAGITPSKRARIARELNFNVICNFGILLIMCLIAAIANGIAWGFEYGSIGGTPALTGFITFWAAVVIREEIAAAKVRAIRGLREYLTEHFMLALALCHTVVAEKQPGDPPKMIFKAQSPDEAALVAARDGFTGINVNVMGKDMHFPVNSSRKRMSTIVRMPDGRILLFCKGAVEGLRTLCIAERELSEEEY------------------------------------------------------------------REWRREHDLAATALENREEKLEEVADKIERDLTLLGGTAIENFIGDIQEADVGVGIQFRFLQRLVLVHVITINGYILINTYR |
2 | 7ky5A | 0.11 | 0.08 | 2.99 | 2.05 | HHsearch | | HNFILLILGAQIFVTNGFASVPLIVIITAIKDGIEDSRRTVVGDIVRVHNNDEIPADMILLSTSDVCYVEDGETNLKVRQGPHALLLRGC--TLRNTKAMGMVIFTGDDTKIMINAG-VTPTKKSRISRELNFSVI----LNFVLLFILCFTAGIVNGVYYKQKSTNGFVSFWV-AVILYQSLVPISLYISVEIIKTAQAIFIYTDVLLYNAK------------------------------------LDYPCTPKSWNISDDLGQIEYIFS-DKTGTLTQNVMEFKKCTINGVSYGRAYTEAL---AGLR-----------------------VDVESE-------G--------R----------REKEE---IAK---DRE---------------------TMIDELRSMSDNTQFCPEDLTFVSKEIVEDLKGSSGEHFLLALALCHS |
3 | 7bgyB | 0.10 | 0.09 | 3.23 | 0.66 | CEthreader | | EGRSKAQANSLKGVKKTAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAGEAAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQ-----RRKTPNEIALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIP--------------------TTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGD-------------------------------VDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADE----TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKG--------GIKERFAQLRKMGIKTVMITGDN |
4 | 1mhsA | 0.06 | 0.06 | 2.49 | 0.78 | EigenThreader | | VVPEDMLQTDTRVGLTSEEVVQRRRKYGFVQEFQAGSIVDEPGDILQVEEGTIIPADGRIVD-AFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNT------FVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVFVLKTVEVDQAYKNKVAEFATDTYKTVCEAKTLG----LSI--KMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGPSLKKADTGIAVEGSSDAARSAAD-----IVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGLTENWLIFIT---------RANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFE |
5 | 6a69A | 0.11 | 0.09 | 3.35 | 0.74 | FFAS-3D | | ----------------VVCVVLVTAFNDSKEKQFRGLQSRIEQDIAQVKYGDLLPADGILIQGNDLKIDESGES-DHVKKSLDKDPLLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKM----------------------------------------------MKDNNLVRHLDACETMGNATAICS-DKTGTLTMNRMTVVQAYINEKHYKKVPTSKILPPEKEGGLPRHVGNKTECALLGLLLDLKRDYQDVRNEIPYKVYTFNSVRKSMSTVLKYRIFSKGASEIILCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTICLAFRDGLTCIVGIEDPEVPDAIKKCQRAGITVRMVTGD- |
6 | 6a69A | 0.10 | 0.09 | 3.30 | 0.83 | SPARKS-K | | GLSFYQPETGWIEGAAIVTAFNDWSKEKQFRGLQSRIEQEQKGDIAQVKYGDLLPADGILIQGND-------LKIDESSSDHVKKSLDKDPLLLSEGSGRMVVTAV--GVNSQTGIIFTLSVLQGKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAE---------------CTPIYIQYFVKFFIIGVTVLVVAVPEGLP----------------------LAVTISLAYSVKKMM-KDNNLVRHLDACETMGNATA-ICSDKTGTLTMNRMTVVQAY---INEKHYKKVPPNILPEKEGGLPRHVGNKTECALLGLLLDLKRDYQDVR-------NEIPYKVYTFNSVRKSKYRILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASEGLRTIC----LAFRDGLTCVVGIEDPEVPDAIKKCQRAGITVRMVTGDN |
7 | 2zxeA | 0.15 | 0.06 | 2.08 | 0.88 | CNFpred | | --------------------------------------------LVEVKGGDRIPADLRIISAH-GCKVDNPQTRSPEFSSENPLETRNIAF---EGTARGVVVYTTVMGRIATLASGLE-VGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------GYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARK----------------------------------------------NCLVKNLEAVETLGSTSTICSDK-TGTLTQNRMTVAHMWFDN---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 5xjcQ | 0.08 | 0.05 | 1.90 | 0.67 | DEthreader | | ELICVAWEIFKFLDHCFNSL-V----------------------------------------------------------------------------------------------------------RREEDGHLFSQLLDMLKFYTGF-EINDQTGNAL----------LQFLTLHDYLLRNFNLFRLESTYEIRQDIEDSVSRMKPWFGGW-------------PYGTKFDRRPFIEQVGLVYVRVYTFNI-IMRR-KPKENNFKAVLTI-VPGLTM-----VTHSNLGSRRVYVLRIELLEVKRLQKSLGVP-------G--DASYTCETAGFFLQVMSRWEEYISVKN----------------------CFRHIKK--IFTQLEEFRASELLRSRSYL--EAKIIAMTCMEAAQ-LE--TFPLWIMIG----------LPPVIKNMFQ |
9 | 2pffB | 0.07 | 0.06 | 2.57 | 1.13 | MapAlign | | -EWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLGVPSPMLSILPAGKQVEISLVNGAKNLVVSGPQSLAKAPSGLDQSRIPFSERKLKFSNRFLPFHSHLSDLINKDLVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGTQPALTLMEKAAFEDLKSKGLI |
10 | 3ixzA | 0.15 | 0.13 | 4.30 | 0.84 | MUSTER | | FGYQEFKSTNIIASFNLVPQQA-TVIRDGDKFQINADQLVVGD-LVEMKGGDRVPADIRILQAQGRKV-SPE---CTHESPLETRNIAFFSTMCLEGTAQGLVVNTGIIGRIASLASG-VENEKTPIAIEIEHFVDIIAGLAILFGATFFIV--------AMCIGYTFLRAMVFF-MAIVVAYVPEGLLATVTVCLSLTAKR----------------------------------------------LASKNCVVKNLEAVETLGSTSVICS-DKTGTLTQNRMTVSHLWF------DNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVM-RVLERCSSILIKGQELPLDEQFQTAYLSLGGLGERVLGFCQLY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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