Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCSSSSSSSSCCCCCCHHHHHHHHHHHCCCCSSSCCCCCCCCCHHHHHHHHHHCSSSSSSCCCCCCCCCCHHHHHHHHHCCCSSSSSCCCCCCHHHSCCCCCSSSCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCSSC RLEPHWGPSPPLPAKSRVAAWVVSNFQERQLRARLYRQLAPHLRVDVFGRANGRPLCASCLVPTVAQYRFYLSFENSQHRDYITEKFWRNALVAGTVPVVLGPPRATYEAFVPADAFVHVDDFGSARELAAFLTGMNESRYQRFFAWRDRLRVR |
1 | 2nzxC | 0.23 | 0.21 | 6.71 | 1.17 | DEthreader | | LLDAY--VNDDPLKR-GFASFVASNP-NAPIRNAFYDALNSIEPVTGGGSVRNYNVK-N-KNEFLSQYKFNLCFENTQGYGYVTE-KIIDAYFSHTIPIYWGSP-S-VAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLA--- |
2 | 2nzxC2 | 0.23 | 0.23 | 7.11 | 2.49 | SPARKS-K | | PNLCAVVNDESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLYNVKNKNEFLSQYKFNLCFENTQGYGYVTEK-IIDAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLNTLD |
3 | 2nzxC | 0.23 | 0.21 | 6.73 | 0.63 | MapAlign | | ASIAVVNDESDPL-KRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLN---VKNEFLSQYKFNLCFENTQGYGYVT-EKIIDAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYEYQNLSFK |
4 | 2nzxC2 | 0.23 | 0.22 | 6.94 | 0.66 | CEthreader | | PNLCAVVNDESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLYNVKNKNEFLSQYKFNLCFENTQGYGYVTE-KIIDAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLNTLD |
5 | 2nzxC2 | 0.23 | 0.23 | 7.10 | 2.35 | MUSTER | | NLCAVVN-DESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLYNVKNKNEFLSQYKFNLCFENTQGYGYVTE-KIIDAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLNTLD |
6 | 2nzxC2 | 0.24 | 0.23 | 7.29 | 5.90 | HHsearch | | EKHPNLVVDESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKII-DAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLNTLD |
7 | 2nzxC2 | 0.24 | 0.23 | 7.06 | 2.00 | FFAS-3D | | -------NDESDPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKII-DAYFSHTIPIYWGSPS--VAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLNTLD |
8 | 2nzxC2 | 0.22 | 0.21 | 6.56 | 0.77 | EigenThreader | | -CFKEKHNDESDPLKRGFASFVAS-NPNAPIRNAFYDALNSIEPVTGGGSVRNTLVKN--KNEFLSQYKFNLCFENTQGYGYVT-EKIIDAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYILHTHKNAYLDMLYENPLNTLD |
9 | 2nzwA | 0.25 | 0.22 | 6.84 | 1.74 | CNFpred | | --------------KRGFASFVASNP-NAPIRNAFYDALNSIEPVTGGGSVRNTLGNVKNKNEFLSQYKFNLCFENTQGYGYVTEKII-DAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLNTLD |
10 | 2nzxC2 | 0.24 | 0.22 | 6.86 | 1.17 | DEthreader | | -------VNDSDPLKRGFASFVASNP-NAPIRNAFYDALNSIEPVTGGGSVRNYNVK-N-KNEFLSQYKFNLCFENTQGYGYVTE-KIIDAYFSHTIPIYWGSP-S-VAKDFNPKSFVNVHDFKNFDEAIDYIKYLHKNAYLDMLYENPLN-A- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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