Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHSSSCCCCCCCCCCCCCCCCCSCCCCCCHHHHHHCCCCCSSSSCCCCCHHHHHHHHHHHHHHHCC MLVVQMPFSFPMAHFILFVFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQLRGMWTINAIGRLGNQMGEYATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATASRIPWQNYHLNDWMEEEYRHIPGEYVRFTGYPCSWTFYHHLRQEILQEFTL |
1 | 5koeA1 | 0.12 | 0.11 | 3.96 | 1.02 | EigenThreader | | LLASGFDEDSCLSRYQSVHY-------RYLISKLRNYEKLHKRCGPGTESYKKALDGDGECKYVVWISFSGLGNRILSLASVFLYALLTDRVLLVDR--GKDMDDLFCEPFLWLLPLDFIDLSHLYLHLVHFCEGDQTFIGKVPWLIVDNYF-VPSLWLIPHLGRYLFHP |
2 | 2ocxA | 0.12 | 0.08 | 2.71 | 2.33 | HHsearch | | ----------------------------------------------------------TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRGSNAFPAFFEPVEDAIDDRVNQLRWWNRPIDCINFREELTREDEANIVCDACL--WRCSEEAERLIFRNIKL |
3 | 2ocxA1 | 0.12 | 0.08 | 2.72 | 0.89 | CEthreader | | ----------------------------------------------------------TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDPAFFEPVEDIAGVPVICDDRVNQLSFPGPFFERDELTELFQAREDSEANTIVCDACLWRCSEEAERLIFRNIK- |
4 | 5koeA | 0.11 | 0.10 | 3.64 | 0.78 | EigenThreader | | LLASGFDEDSCLSRYQSVHYYLISKLRNYEKLHKRCG---PGTESYKKALKQLDQDGDGECKYVVWISFSGLGNRILSLASVFLYALLTDRVLLVDFL-------GMSWLLRCYGYMVKNQLSHLYLHLVHDYEGDQTFIGKVPWLKTDNYFVPSLWLFFHHLGRYLFHP |
5 | 2ocxA1 | 0.12 | 0.08 | 2.71 | 0.46 | FFAS-3D | | ----------------------------------------------------------TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDQPFSNAFPAFFEAGVPVICDDRVNQLSFPGPFFPNRPDEQIREDSEANTIVCDACL-WRCSEEAERLIFRNIK- |
6 | 5n8oA | 0.10 | 0.09 | 3.49 | 0.56 | SPARKS-K | | VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVRLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLK--ETLTLLDGAARHNVQVLITDSGQRMAMKDAGVNTYRWQGGEQRPA---TIISEPDRNVRYARLGEESVAQVS---GVREQAILTQAIRSELKT |
7 | 2jioA | 0.13 | 0.09 | 3.29 | 0.68 | CNFpred | | --------CMGINQRVQGVFANNLIHNLHLITGQIC-----------------------RPGATSFSLT-GQPNACGGVRDGGALSHLLPAGRAIPNKHRAEMEKLWGLPEGRIAPEP-------GYHTVALFEALGRG--VKCMIICETNPAHTLP--NLNKVHKAMSH |
8 | 5koeA1 | 0.09 | 0.07 | 2.66 | 0.83 | DEthreader | | -----------------------------------DKLLG--ASGFDES-KGPGTEKKALCKYVVWISFSGLGNRILSLASVFLYALLTDRVLLVDRGDMDDLFC--EPFSWLLPLDFPMT-SHLYLHLDKMFFCDQTFIKVPWLIVKTDNYFVPSLWLFATVFHHLGRH |
9 | 5koeA1 | 0.11 | 0.10 | 3.64 | 0.92 | MapAlign | | -----EDSCLSRYQSVHPYKPSSYLISKLRNYEKLHKRCGPGTESYKKALKQLDQDGDGECKYVVWISFSGLGNRILSLASVFLYALLTDRVLLVDRGK--DMDDLFCPFLWLLPLDFVIDLSHLYLHLVHDYGDHDKIGKVPWLIVKTDNY---FVPSLHHLGRYLFHP |
10 | 5n8oA | 0.12 | 0.11 | 3.99 | 0.55 | MUSTER | | SGQGGAAGQRERVAELVMMAREQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLS--LKETLTLLDGAARHNVQVLITDSGQRTLMAMKDAGVNTYRWQGGEQRPATIISEPD-RNVRYARLAGEESVAQ--VSGVREQAILTQAIRSELKT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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