>Q08830 (241 residues) IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMSDGGGWTVIQRRSDGSE NFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNF KVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEE DQSGWWFNRCHSANLNGVYYSGPYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNV I |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMSDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGVYYSGPYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI |
Prediction | CCCCCCCCCCCHHHHHHHCCCCCSSSSSSSCCCCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCHHHHHHHHCCCCCCCCCSSSSSSHHHHHHCCCCCSSSSSSCCCCCCSSSSSSCCCCCCCHHHCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCSSSSSSSSCCCCCCCCCC |
Confidence | 9988899898989999719987727999958999828999744688872456764033323358999998873884668875477740156664037616424441699987889962566788224057741444687787554444445544300179866656767788877541025766316677543438866799876678881787157898501337999761488898889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMSDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGVYYSGPYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI |
Prediction | 8737676315304302746444200020304754520201010343442220222233424333315402420242344423011223313433442302021212224333220213323233232212023042312222022333334432222343241312332324242200332200101200220001021242644342330012220423410022035202346243427 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCHHHHHHHCCCCCSSSSSSSCCCCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCHHHHHHHHCCCCCCCCCSSSSSSHHHHHHCCCCCSSSSSSCCCCCCSSSSSSCCCCCCCHHHCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCSSSSSSSSCCCCCCCCCC IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMSDGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKIDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGVYYSGPYTAKTDNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI | |||||||||||||||||||
1 | 1ei3C | 0.45 | 0.44 | 12.97 | 1.50 | DEthreader | ----QETTGRDCQDIANKGARKSGLYFIKPQKAKQSFLVYCEIDYGNGWTVLQRRLDGSEDFRRNWVQYKEGFGHLSPDTTEFWLGNEKIHLITTQLPYALRIELEDWSGKKGTADYAVFKVGTEEDKYRLTYAYFGGERGDAFDGFNFPSDKSYTYHNGMRFSTFDNDNDNFEGNCAEQDGSGWWMNRCHAGHLNGPYYIGGVYSRGDNGIIWATWRDRWYSMKKTTMKIIPFNRLDGQ- | |||||||||||||
2 | 6y41A | 0.46 | 0.41 | 11.99 | 4.88 | SPARKS-K | -----SGPWRDCLQALEDGHDTSSIYLVKPENTNRLMQVWCDQHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNI---DGEYWLGLENIYWLTNQGNYKLLVTMEDWSGRKVFAEYASFRLEPESEYYKLRLGRYHGNAGDSF-----------TWHNGKQFTTLDRDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYGGHYRSRYQDGVYWAEFRGGSYSLKKVVMMIRPNPN----- | |||||||||||||
3 | 3ghgI | 0.47 | 0.44 | 12.94 | 1.66 | MapAlign | ------ITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSTGTTEFWLGNEKIHLISTQIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFGGDAGDAFDGFDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYGGTYSKASDNGIIWATWKTRWYSMKKTTMKIIPFNR----- | |||||||||||||
4 | 3ghgI | 0.44 | 0.44 | 12.87 | 1.10 | CEthreader | TVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPGTTEFWLGNEKIHLISTQIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGDAGDAFDGFDFGDDPSDKSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIG- | |||||||||||||
5 | 1n73C | 0.45 | 0.45 | 13.10 | 2.76 | MUSTER | ANKISPITGKDCQQVVDNGGKDSGLYYIKPLKAKQPFLVFCEIENGNGWTVIQHRHDGSVNFTRDWVSYREGFGYLAPTTTEFWLGNEKIHLLTGQQAYRLRIDLTDWENTHRYADYGHFKLTPESDEYRLFYSMYLDDAGNAFDGFDDPQDKFYTTHLGMLFSTPERDNDKYEGSCAEQDGSGWWMNRCHAGHLNGKYYFGDVEFPYDDGIIWATWHDRWYSLKMTTMKLLPMGRDLSGH | |||||||||||||
6 | 3ghgI | 0.44 | 0.44 | 12.76 | 3.23 | HHsearch | TVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPGTTEFWLGNEKIHLISTAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGDAGDAFDGFDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIG- | |||||||||||||
7 | 4epuA | 0.45 | 0.40 | 11.64 | 2.93 | FFAS-3D | --------FRDCADVYQAGFNKSGIYTIYINNMPEPKKVFCNMDNGGGWTVIQHREDGSLDFQRGWKEYKMGFGNP---SGEYWLGNEFIFAITSQRQYMLRIELMDWEGNRAYSQYDRFHIGNEKQNYRLYLKGHTGTAGK----------QSSLILHGADFSTKDADNDNCMCKCALMLTGGWWFDACGPSNLNGMFYTAGQNHGKLNGIKWHYFKGPSYSLRSTTMMIRPLD------ | |||||||||||||
8 | 1n73C | 0.43 | 0.42 | 12.41 | 1.73 | EigenThreader | ANKISPITGKDCQQVVDNGGKDSGLYYIKPLKAKQPFLVFCEIG--NGWTVIQHRHDGSVNFTRDWVSYREGFL-APTLTTEFWLGNEKIHLLTGQQAYRLRIDLTDWENTHRYADYGHFKLTPESDEYRLFYSMYLDGDAGNAFDGFDFGDDFYTTHLGMLFSTPERDNDKYEGSCAEQDGSGWWMNRCHAGHLNGKYYKTDVEFPYDDGIIWATWHDRWYSLKMTTMKLLPMGRDLSGH | |||||||||||||
9 | 3ghgC | 0.47 | 0.44 | 12.93 | 4.85 | CNFpred | ---------KDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPGTTEFWLGNEKIHLISTQIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGAGDAFDGFDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKYDNGIIWATWKTRWYSMKKTTMKIIPFNRL---- | |||||||||||||
10 | 3ghgI | 0.46 | 0.45 | 13.08 | 1.50 | DEthreader | ----HDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTTTEFWLGNEKIHLISTQIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFGGDAGDAFDGFDFPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKTDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIG- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |