>Q08554 (115 residues) MALASAAPGSIFCKQLLFSLLVLTLLCDACQKVYLRVPSHLQAETLVGKVNLEECLKSAS LIRSSDPAFRILEDGSIYTTHDLILSSERKSFSIFLSDGQRREQQEIKVVLSARE |
Sequence |
20 40 60 80 100 | | | | | MALASAAPGSIFCKQLLFSLLVLTLLCDACQKVYLRVPSHLQAETLVGKVNLEECLKSASLIRSSDPAFRILEDGSIYTTHDLILSSERKSFSIFLSDGQRREQQEIKVVLSARE |
Prediction | CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCSSSSSSHHHHCCCCCSSSCCCCCCSSCCCCSSSSSCCSSCCCCCCSSSSSSSCCCCCSSSSSSSSSSCCC |
Confidence | 9977789854689999999999986100341489954873357836899855661777554662899816848940997420564888617999997288831689999951489 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MALASAAPGSIFCKQLLFSLLVLTLLCDACQKVYLRVPSHLQAETLVGKVNLEECLKSASLIRSSDPAFRILEDGSIYTTHDLILSSERKSFSIFLSDGQRREQQEIKVVLSARE |
Prediction | 7644463332301330112010010104204511030255055741103030550374563144643414227512121344151476533010202247545334042315378 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCSSSSSSHHHHCCCCCSSSCCCCCCSSCCCCSSSSSCCSSCCCCCCSSSSSSSCCCCCSSSSSSSSSSCCC MALASAAPGSIFCKQLLFSLLVLTLLCDACQKVYLRVPSHLQAETLVGKVNLEECLKSASLIRSSDPAFRILEDGSIYTTHDLILSSERKSFSIFLSDGQRREQQEIKVVLSARE | |||||||||||||||||||
1 | 5eqxA | 0.06 | 0.06 | 2.61 | 1.17 | DEthreader | FPVYFFEIQILKV-VKAL-DYN-REGIAFPASKTFTVQSSKLVDYILGTYQAIDAASNV-KYVMGNGYLMIDKTAEIKFVKNMNIVNKTITAEVLAIDEYTGKTSTGTVYVRVPF | |||||||||||||
2 | 1op4A | 0.19 | 0.17 | 5.33 | 1.18 | SPARKS-K | ---------------EASGEIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRVQYESEPADFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREP | |||||||||||||
3 | 1op4A | 0.19 | 0.16 | 5.05 | 2.25 | HHsearch | --------------------EASIATGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKKVQYESEPADFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREP | |||||||||||||
4 | 1op4A | 0.22 | 0.19 | 6.03 | 1.19 | FFAS-3D | -ASGEIALCKTGF---------------PEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVYESSEPDFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREP | |||||||||||||
5 | 1op4A | 0.23 | 0.17 | 5.18 | 1.17 | CNFpred | --------------------------------YSAVLPKDVHEGQPLLNVKFSNCNRRKVQYESSPADFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREP | |||||||||||||
6 | 5erdA | 0.09 | 0.09 | 3.32 | 1.17 | DEthreader | IPFTFASGNGYFHTLI-KEVDYEEEGIHFSSVISIYVSESSSKGQIIG-NFQAFDPAHA-RYVKLDNWISVDVTSEIKLAKLPDFEVGTYTVKIVAISEDPRKTITGTVLINVED | |||||||||||||
7 | 5iryA | 0.10 | 0.10 | 3.51 | 1.17 | DEthreader | ---YKILQGNENGNFVKPL-NY-VEGPECHPVKVIQSQDGFPAGQELLGYKALDGEG-L-RYQKLDNWFEINHTGDLRTLKVLDRENNQYNISVVAVD-AVGRSCTGTLVVHLDD | |||||||||||||
8 | 5tpkA2 | 0.13 | 0.10 | 3.62 | 0.99 | SPARKS-K | ---------------------DDNSPVFTNSTYTVVVEENLPAGTSFLQIEAKDDLGANVSYRIRSHLFALHPTGELSLLRS--LDEASITFLAEAFDIYGMPPGIATVTVIVKD | |||||||||||||
9 | 4xhzA | 0.12 | 0.11 | 4.02 | 0.45 | MapAlign | ----FTNSTYTVLVEENVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADASRVRYRVDASIFEVEESGRVITRVNLNEEPTIFKLVVVAFDDGPVMSSSATVKILVLH | |||||||||||||
10 | 4xhzA3 | 0.14 | 0.11 | 3.87 | 0.33 | CEthreader | --------------------MNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAPGLPASRVRYRVDASIFEVEEDGRVITRVNLNEPTTIFKLVVVAFDDEPVMSSSATVKILVL- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |