>Q06124 (375 residues) TRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNR YKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTV NDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTL RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVH CSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAV QHYIETLQRRIEEEQKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTPPCAEMREDSAR VYENVGLMQQQKSFR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | TRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTPPCAEMREDSARVYENVGLMQQQKSFR |
Prediction | CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCSSSSCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHHHHHHHHHHHCCCCSSSSCCCCCSCCCCCCCSCCCCCCCCSSSSCSSSSSSSSSSCCCSSSSSSSSSSSCCCCCSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC |
Confidence | 910099999999999997521123579999999997516878886556531843331389999799877457730479998999834443336777765556888746998449971689999999982199499985883006875564018999971688059999999997298899999999705887318999987489999999999799999999999999746899988998699973467999999999999971998777899999999976223479999999999999999998411203555110223444311234456555666789898999885445666453345666111221269 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | TRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTPPCAEMREDSARVYENVGLMQQQKSFR |
Prediction | 761417404510540361165264235103500450473527442324204365136201141010123000203326565531000000103032314123254411000000015401400010011250200000022324344202400057633541350303033264362111011102333443431101001023022330173041004004202521653575200000000100000000000001200565443461101100220051013000044002000100020043035415545435644451552544255545554444354435244453465525135435455555638 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCCSSSSCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHHHHHHHHHHHCCCCSSSSCCCCCSCCCCCCCSCCCCCCCCSSSSCSSSSSSSSSSCCCSSSSSSSSSSSCCCCCSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC TRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTPPCAEMREDSARVYENVGLMQQQKSFR | |||||||||||||||||||
1 | 2b3oA | 0.54 | 0.42 | 12.16 | 1.17 | DEthreader | ATRVN-AADIENR-F---------WE--EFESLQKQEVKNL---HQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGP-DE-NA-KTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKK--KL-E-VL--------------------------------------------------------- | |||||||||||||
2 | 6md7A3 | 0.98 | 0.75 | 20.99 | 3.35 | SPARKS-K | TRINAAEIESRVRELSKL--------QGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVL--HDGDPPVSDYINANIIM-----------PEKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL-------------------------------------------------------------------- | |||||||||||||
3 | 2nlkA | 0.36 | 0.32 | 9.53 | 1.03 | MapAlign | -AIPVKQFVKHIGELYSN------NQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLR----PLPHSDYINANYVDG--------YNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWP-TENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDK---STVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAM--------------- | |||||||||||||
4 | 6md7A3 | 0.99 | 0.75 | 21.14 | 0.61 | CEthreader | TRINAAEIESRVRELSK--------LQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPP--VSDYINANIIMP-----------EKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL-------------------------------------------------------------------- | |||||||||||||
5 | 6md7A3 | 0.99 | 0.76 | 21.21 | 2.53 | MUSTER | TRINAAEIESRVRELSKL--------QGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPP--VSDYINANIIM-----------PEKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL-------------------------------------------------------------------- | |||||||||||||
6 | 2shpA | 0.99 | 0.74 | 20.69 | 2.10 | HHsearch | TRINAAEIESRVRELSK----------GFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLH-------DSDYINANIIM-----------PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRSIYMAVQHYIETL-------------------------------------------------------------------- | |||||||||||||
7 | 6md7A3 | 0.98 | 0.75 | 20.99 | 3.70 | FFAS-3D | TRINAAEIESRVRELSK--------LQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDG--DPPVSDYINANII-----------MPEKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETL-------------------------------------------------------------------- | |||||||||||||
8 | 2nlkA | 0.33 | 0.30 | 9.04 | 1.57 | EigenThreader | -AIPVKQFVKHIGELYSN------NQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLP----HSDYINANYVDGY---------NKKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNVEKGRRKCDQYWPT---ENSEYGNIIVTLKSTKIHACYTVRRFSIRNTKVRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAAR--MPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKS-----TVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGNQLHSYVNSILLEKQFKLVTQCFSA---QKECNKEKNRNSSVVPSERARVGLAPD----YINASYIMGY | |||||||||||||
9 | 4gwfA | 1.00 | 0.79 | 22.10 | 3.06 | CNFpred | TRINAAEIESRVRELSK----------GFWEEFETLQQQECKLLYSRKEGQRQENKNKNRCKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPE----------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQKS---------------------------------------------------------- | |||||||||||||
10 | 2b3oA2 | 0.55 | 0.43 | 12.38 | 1.17 | DEthreader | TRVN--AADIENR-F---------WE--EFESLQKQEVKNL---HQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGP-DE-NA-KTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIETTKK--KL-E-VL--------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |