Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCSSSSSSSSSCCHHHHHCCCHHHHHHHHCCCCCCCCCCCSSCCCCCCCCHHHHHHCCCCCCSSSCCCCCCCCCCCHCHCCSSCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCSSCCCCCCSSCCCCCCHHHCCCSCCCCCSCCCCCCCSSCCCCCCHHHHCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCHHHHCCCCCCCCCCCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCCCCCCCCCSSCCCCCCHHHCCCSCCCCCSCCCCCCCSSCCCCCCHHHCCCSCCCCCCC MPGTPGSLEMGLLTFRDVAIEFSPEEWQCLDTAQQNLYRNVMLENYRNLAFLGIALSKPDLITYLEQGKEPWNMKQHEMVDEPTGICPHFPQDFWPEQSMEDSFQKVLLRKYEKCGHENLQLRKGCKSVDECKVHKEGYNKLNQCLTTAQSKVFQCGKYLKVFYKFLNSNRHTIRHTGKKCFKCKKCVKSFCIRLHKTQHKCVYITEKSCKCKECEKTFHWSSTLTNHKEIHTEDKPYKCEECGKAFKQLSTLTTHKIICAKEKIYKCEECGKAFLWSSTLTRHKRIHTGEKPYKCEECGKAFSHSSTLAKHKRIHTGEKPYKCEECGKAFSRSSTLAKHKRIHTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKAFKRLSTLTKHKIIHAGEKLYK |
1 | 3cmuA | 0.05 | 0.04 | 2.05 | 0.83 | DEthreader | | AALGEKGKGDRSMDE--GKTCANLLCSQPDQAEICDALARGVAGNLKQSN-----T-LLIFINTALKFYAR-SIMRLDSMDMGRVVIAAQREGK--IYARKLGVDILLCIVVDLIFINQIRTTTGGNALKFAVRLDIRRTRVFQILYGEGI--VETISLDIALGAGGLPMGR--AAQREGKTCAFINLLCC-LARGVDVIVVDS-ALTPKAESHMGLAARMMSQAMFN-IRMKIGVMFGN-----PETTTK--DI--RR----IGAVKEGENVVGSETR-QILYGEG-----MDVETIS-DILGAGGLPMVVIAAEKTCAFIDALDPIYAVVVDSIFI---------RIGAVKEGENVVGSEQILNG--D---AGAWYSYKGEKIGQANATAWLKDNPET------- |
2 | 5v3jE | 0.42 | 0.29 | 8.37 | 6.86 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHQLSHHKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
3 | 1vt4I3 | 0.05 | 0.05 | 2.30 | 1.50 | MapAlign | | ------LHRSIVDHYNIPKTFDSDDLIPPYDQYFYSHIGHHLKNIERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5v3jE | 0.41 | 0.28 | 8.24 | 1.55 | MapAlign | | -------------------PHKCKECGKAF--HTPSQLSHHQKLHVG-------------------------------------------------------------------------------------------------------EKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH------- |
5 | 5u1sA | 0.04 | 0.04 | 2.04 | 1.11 | MapAlign | | TKIASNNIDLAIEDITTVDHSL-NSIYSLLMWGHINSTVKQHLMIIVKLINNNALASSEIIFLFNETNLFQAHSLKNI-------LLADFSTWNDYYLSNLKILALQIILKIYLNSFYLSYSMLYDGLDKIMLLDILSYEETTEVQRAIKSEYCNMSENRLLCLNIISVLFNASVLFKSHLAEITILKFFAQKKIEIFSCLIPSENWSQLMIFCSDLDLNKELLIRIVYLLNFVKMLLLNFDKLSLSSIVPYADNYAYLSLYMIFNSANVISADCKSLSFSFFQLIKINHELSSSTNFSLTDLPTITESIRVSAAQNINVITIDFCNLLLSKLMEDLIYFVLDINISMILNPNDLSTELVMNEKPYIGHGGGLLGCSSAAPMVLGNLWDKDIDKFAPVIYGLPIKF- |
6 | 5v3jE | 0.42 | 0.28 | 8.31 | 1.10 | CEthreader | | ----------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
7 | 2wjvA | 0.05 | 0.05 | 2.30 | 1.11 | MapAlign | | PIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVREVTLHKDGPLGETVLLGFIPAKADSVVVLLCRQPCALSWLVKIPSEQEQLRARQITAQQINKLEELHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPLMQGDEI-----CLRYLAPLWKGIGHVAIEGAPVEVQLPKRFTAQGLPDLVKGKTVTSATIVQTGLKVVRLCASFLALDVIC--CTCVGAGDPRLFRIIDESTMVPVLGAKQLILVGSLFERLQVQMHPALSSLQNGVTARDKPMFFYVTGQEEIASSGTSYLNRVEKITTKLLKADQIGIITPYEGQRVEASVDAFREKDFI---ILSCRANEHQGFLVIIVGN-PKALSKQPLWNHL |
8 | 5v3jE | 0.42 | 0.29 | 8.37 | 3.47 | MUSTER | | -----------------------------------------------------------------------------------------------------------------------------PHKCKECKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
9 | 5v3jE | 0.42 | 0.29 | 8.37 | 2.40 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTLSHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
10 | 5v3jE | 0.42 | 0.29 | 8.37 | 2.93 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------PHKCKECKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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