Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHSSCCCCCCSSSSCCCCC YLADQAKLSFERKKQGCNKRAARKAPAPVTPPAPVQNKNKPNKKARVLSKKEERLKKHIKKLQKRALQFQGKVGLPKARRPWESDMTTEHDDLLVEMRNFIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC |
1 | 6a6iA | 0.78 | 0.46 | 12.99 | 1.37 | SPARKS-K | | ----------------------------------------------------------------MLPERLESESGHLREASALLP-TTEHDDLLVEMRNFIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC |
2 | 6a6iA | 0.80 | 0.47 | 13.33 | 1.33 | MUSTER | | -----------------------------------------------------------------MLPERLESESGHLREASALLPTTEHDDLLVEMRNFIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC |
3 | 6a6iA | 0.79 | 0.47 | 13.16 | 2.65 | HHsearch | | ------------------------------------------------------MLP---ERL----ESESG-HLRE---ASALLPTTEHDDLLVEMRNFIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC |
4 | 6a6iA | 0.83 | 0.48 | 13.66 | 1.17 | FFAS-3D | | --------------------------------------------------LPERLES----------------ESGHLREASALLPTTEHDDLLVEMRNFIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC |
5 | 2j69A | 0.08 | 0.07 | 2.75 | 0.83 | DEthreader | | EDITIASKNLQQGV-----LTLLQK------VMRAPCRVFNLAYCTVEFRERAIAELRQVRTLARLACNH-T--AVRRIPLLRISVEPEFNKLTGIRDEFQKEIINTRDAFLSRSASQYGASYNQITDDN-SPG-WA--WAMGLLSA-GFDYEREVSKN |
6 | 2mvgA | 0.11 | 0.11 | 3.84 | 0.64 | SPARKS-K | | VERTNAALESSSKDLKNKKKEATGKGVLFEAFTGLKTGSKVTSGGLALREAKVQAIVETGKFLKIIEEEALKLK--------ETGNSGQFLAMFDLMLEVVESLEDVGIIGLKARVLEESKNNPINAAKAQIENQLKVVKEKQNIENGGEKKNNKSKKK |
7 | 3cuqA | 0.10 | 0.08 | 2.83 | 0.79 | MapAlign | | --SKQLDMFKTNLEEFA---------------------------SKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKRNGGLITLEELHQQVLKGRAQDVQDDLIRAIKKLFGIIPV-GGTYLIQSVP--- |
8 | 6a6iA | 0.80 | 0.47 | 13.33 | 0.54 | CEthreader | | -----------------------------------------------------------------MLPERLESESGHLREASALLPTTEHDDLLVEMRNFIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC |
9 | 1lihA | 0.08 | 0.08 | 2.96 | 0.60 | MUSTER | | SSLQHCQQGFVISNELRQQQSELQTRINLSRSAARMMMDASNQQSSAKTDLLQNAKTTLAQAAAHYANFKNMTPLPAMAEASANVDEK-YQRYQAALAELIQFLDNGN--------MDAYFAQPTQGMQNALGEALGNYARVSENLYRQTF----DQSA |
10 | 1i27A | 0.16 | 0.07 | 2.30 | 0.92 | HHsearch | | -------------------------------------------------------------------------GPLGS------GDVQVT---EDAVRRYLT---RK--PMTTKDLLKKFQTKKTEQTVNVLAQILKRLNPERKMINDKMHFSLKE--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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