>Q03112 (173 residues) LVTSQNSDLLDDEEVEDEVLLDEEDEDNDITGKTGKEPVTSNLHEGNPEDDYEETSALEM SCKTSPVRYKEEEYKSGLSALDHIRHFTDSLKMRKMEDNQYSEAELSSFSTSHVPEELKQ PLHRKSKSQAYAMMLSLSDKESLHSTSHSSSNVWHSMARAAAESSAIQSISHV |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | LVTSQNSDLLDDEEVEDEVLLDEEDEDNDITGKTGKEPVTSNLHEGNPEDDYEETSALEMSCKTSPVRYKEEEYKSGLSALDHIRHFTDSLKMRKMEDNQYSEAELSSFSTSHVPEELKQPLHRKSKSQAYAMMLSLSDKESLHSTSHSSSNVWHSMARAAAESSAIQSISHV |
Prediction | CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC |
Confidence | 98765555543012213342154432123567667889999867788642224688864102679863102221345333456678897311010220246534565237755704531167788887999998720468877877789657888622577666665556679 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | LVTSQNSDLLDDEEVEDEVLLDEEDEDNDITGKTGKEPVTSNLHEGNPEDDYEETSALEMSCKTSPVRYKEEEYKSGLSALDHIRHFTDSLKMRKMEDNQYSEAELSSFSTSHVPEELKQPLHRKSKSQAYAMMLSLSDKESLHSTSHSSSNVWHSMARAAAESSAIQSISHV |
Prediction | 74446544215476263422345755656355547654355534574554446546435132534453344654641133143244245415245256651545315414443447514541344254302210131256552444444434112314434444432432446 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC LVTSQNSDLLDDEEVEDEVLLDEEDEDNDITGKTGKEPVTSNLHEGNPEDDYEETSALEMSCKTSPVRYKEEEYKSGLSALDHIRHFTDSLKMRKMEDNQYSEAELSSFSTSHVPEELKQPLHRKSKSQAYAMMLSLSDKESLHSTSHSSSNVWHSMARAAAESSAIQSISHV | |||||||||||||||||||
1 | 3cuqC | 0.06 | 0.05 | 2.31 | 0.43 | CEthreader | LQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF---------------- | |||||||||||||
2 | 6yvuB | 0.04 | 0.04 | 2.09 | 0.52 | EigenThreader | LNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKIIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKS | |||||||||||||
3 | 4btgA2 | 0.12 | 0.11 | 3.88 | 0.43 | FFAS-3D | -------------KNRTAVYEAVSQWHEASTEFAYEDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAV--TLLRKIEMASAVHLAQIDDSSDLHVGINRRIRIWAGLAEAEALTKVLGDSNAL | |||||||||||||
4 | 6ybwz | 0.13 | 0.12 | 4.18 | 0.99 | SPARKS-K | DEDEDVKDNWDDDDDEKKEEAEVKPEVKISEKKKIAEKIKEKERQQKKRQEEIKQ------LADKLRLKKLQEESDLELAKETRDDFTEFGKLLKDKITQYEKSLYYASFLEVLCISLEIDDLKKITNSLTVLCSEKQKQEKQSKAKKKKKGVVPGGGLKAT----------- | |||||||||||||
5 | 5cwnA | 0.15 | 0.10 | 3.29 | 0.64 | CNFpred | ------------ESLERAREASERGDEEEFRKAAEK--------------------ALELAKRLVEQAKKEGDPELVLEAAKVALRVAELAAKNG-----------------------DKEVFKKAAESALEVAKRLVEVASKEG----DPELVLEAAKVALRVAELAA---- | |||||||||||||
6 | 7jgdA | 0.05 | 0.04 | 1.94 | 0.83 | DEthreader | TDDLIKTENDLIPQYLRFLQEWVTRWDQYYTTNVDRKEYNCKENEST-------PNGLPKGCIYPECISAN-DKYIVRQQLCEAYYLWKQYNPTG--K--------------GID-DANKKACCAIRGSFYDLEDIIKGDLNTKRARTDWWEN-KTIRQLVWDAMQSGVPCMG | |||||||||||||
7 | 5dwbA | 0.09 | 0.09 | 3.34 | 0.74 | MapAlign | HVMLDNVSEEQYQQISDYFVPLVNKPKLKSRDAIGQAFVMATEVCPDANPSDLWHHVLYRIYIREKIGTDPSQSWVRTSGEAFEVALVERYNPVLARHGIRVMIEKQGGGRSPDAEGFGVVGGIHAKVDIPASRIMMGEGLLSLGTPDRPSDKRNYIEGHGDTTPSGRHIYVS | |||||||||||||
8 | 5n5xA2 | 0.13 | 0.13 | 4.58 | 0.64 | MUSTER | -IIVDHPEWASLFNNADEREKESIGALVSQIKLKERERISRVQNLIEHENSHDEDKYLRLS-IATNELLESWQKTKDESILSGSLSHSKLKNLLENSDSFASIPEFSDVTFIGFEKLLHLFLHEDVPGIFYNKLLQCWVLVSPQAELEIVKDIIWSLARLEKPSLFEPIQNEI | |||||||||||||
9 | 2pffB | 0.16 | 0.16 | 5.18 | 0.67 | HHsearch | CLTEFENCYLEGNDIHALAAKLLQE-NDTTAKRPFDKKSGEGNAQLVATDDYFEERDLYQTYHVLVDLIKSAETLSERTTLDAEKVFTQGLNILEWLENPSNTPDK-DYLLS-IPISCFFVSVRKAITVLFFIGVRCYEAYPNTSL--PPSILEDSLENNEGVPSPMLSISNL | |||||||||||||
10 | 1itkB | 0.10 | 0.10 | 3.65 | 0.41 | CEthreader | EDKAVNWGPEDEFETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEENLGPEPEAAPIEQQGLGWQNKNGNSKGGEMITSGIEGPWGYINNLLDYEWEPEKGPGGAWQWAPKSEELKNSVPDAHDPDE | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |