>Q01459 (385 residues) MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEV FVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRA SWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDV AWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKM SINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINS SISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLD YSGDAVAKQQTEEMWEVLKPKLLQR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEVFVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYSGDAVAKQQTEEMWEVLKPKLLQR |
Prediction | CCCCCCCCSSSSCCCCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCHHHCCCSCCCCCSSSSSSCCCCCSSSCCCHHHHHHHHHHHHCCHHHHHHSSSCCCSSCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHSSSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCHHHHHHHHHHCCCSSSSCCCCCCCSSSSSCCCCCSSSSSSCCHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC |
Confidence | 9988667533440588888883799998545785688887998782424541024524899980899826237824436888874129234310111894206897537788569999999999999999997998389760589999958999999999999999877568838999985798753223578999997599999832678998889998888799425789999999939996786887547762133688888888886778878888878776233799999999717977997644576369993799967999948999999999999970994899995247889997177778679999999998519 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEVFVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYSGDAVAKQQTEEMWEVLKPKLLQR |
Prediction | 7544424412122222433431000000000001246243123411400110331210000001164330331324314412413422340000001220201232420131032661043004100400373501000000010353437115101300430162047444400000000022431223112043005000000000000001233632000000011024012201646033500000000001003144365442313141414314223320221004200520675613331166020000102276443010012103002200410273301000000002002313133573332004103630478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCSSSSCCCCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCHHHCCCSCCCCCSSSSSSCCCCCSSSCCCHHHHHHHHHHHHCCHHHHHHSSSCCCSSCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHSSSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCHHHHHHHHHHCCCSSSSCCCCCCCSSSSSCCCCCSSSSSSCCHHHHHHHHHHHHHHCCCSSSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEVFVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRGIGMWNANCLDYSGDAVAKQQTEEMWEVLKPKLLQR | |||||||||||||||||||
1 | 1x6lA | 0.18 | 0.16 | 5.08 | 1.33 | DEthreader | --------------------------A-NNLVKVKNAGADTDGSHL-P---YKQNSGKVVGSYFVEAGTVDKIPAQNLTHLLYFIIANFGQLMALKAHDLKILPSIGSPFFFMGDKVKRDRFVGSVKEFLQTWKFDGVDIDWEFPGGGSPQDGETYVLLMKELRAMLDQLSRKYELTSAISAGKDKID-K-VAYNVAQNSMDHIFLMSYDFYGAFDLKN-LGHQTALNTTVNGVNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFT--GTATGPVKG-WENGIVDYRQIASQFMSGEWQYTYDATAEAPYVFKP---STGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDAD-----------NGDILNSMNASLGNS | |||||||||||||
2 | 4s3jA2 | 0.17 | 0.13 | 4.20 | 1.77 | SPARKS-K | -----------------------------------------------------TKRSVESIAYLQPSTLVNATRNPFLTYLAYFPTETAKIANIATQGQTPMLVITNIESVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVAP---EDREAYNRFLRNVKIRLPS---GYTLSTTLVPKTNQKFFEAHDYKAQGQIVDFVVIMTYDWGW---QGGPPMAISPIGPVKEVLQYAKSQM-PPQKIMMGQNLYGFDWKL-PFKQGN----------------PPAKAVSSVAAVALARKYNVPIRYDFTAQAPHFNYFDENGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGLPF-----------PQNWRLLVENFTIT | |||||||||||||
3 | 6jm7A | 0.20 | 0.16 | 5.23 | 0.79 | MapAlign | --------------------------------------------------------DKIVVCYYGTWADVDDIDPFLCTHLVYAFIF-KQFTSLKEKNNLKTLVAVGGYSIMAAEPEYRQNFIQTSLAMILEYNFDGLDVDWEYPNRHGEDDIEQFSTLLKELREEFDNY--GLLLTVAVSAVEEAA-VQSYDVPSVAKYVDYIGVMTYDMHGAWD--SVTGHNAPLFNVNNAVQYWLSAGCPPEKLVMGVPFYGRTFQLSDP---SVNAP-NSPSNGAGLATAESGYVGYNEFCYILQQESWTVQTDNLAKVPYAFL-----DYNWVSFDNVESMTAKVEYANSFNLRGIMLWSIETDDFHGLCGEGTFP--LLNTINTVLAEG | |||||||||||||
4 | 4ay1A | 0.18 | 0.15 | 4.74 | 0.57 | CEthreader | --------------------------------------------------------AYKLVCYFTNWFTPENIDPFLCSHLIYSFAYQTINSLKTKNPKLKILLSIGGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYP---DQKENTHFTVLIHELAEAFQKDFERLLLTAGVSAGRQMIDN-SYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLASAETTVGAPA--SGPGAAGPITESSGFLAYYEICQFLK--GAKITRLQDQQVPYAVKGN-----QWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCNQG-PYPLVQAVKRSLGS- | |||||||||||||
5 | 5y29A | 0.21 | 0.19 | 6.09 | 1.66 | MUSTER | ---------------SLLNSRYKLVCYYTNWSWYRPGIGKYSDIDPSLCTHIV----YGFAVLGNDGLMTAHDTWSD------YDNRFYERVVEYKRYGIKVSLA-DKYSKLVNDPAARAKFVQHAVAFLEKYGFDGLDLDWEYPKKGPDSDKQGFADLVHELSAVLKPK--GLLLSAAVSPNKMVID-AGYDVPVLARLLDWIAVMTYDYHGQWDK--KTGHVAPLYNANYTIHYWMEKGTPASKIVMGMPMYGQSFTIENRGIHGLNIPVSDGGEPGEYTRAKG-FLAYYEICDRIRNSGWTVVKDPYQRMGPYAYKGN----QWVSFDDVEIIKKKVNFIKSLNLGGGMIWALDLDDYRNRCGQGK--HPLLNAIKTELLNP | |||||||||||||
6 | 5gztB | 0.15 | 0.14 | 4.71 | 1.57 | HHsearch | QLVLKFNAYGWDNTSPAGYEKNSA-------QFAVSSDKGGTTAKGVTSDTVKAFVQGKIVSYIPAWVDERGVDATKFTHLYYAFGRDASLTGLAKNPNLKVLVIGGWESDAALTPESREVFANSALDFMNKYNLDGIDLDWEYPVYGRPEDKANFTALLKLLREKLDAQSKYYELAIAAGASKTYT--DSVELTKITPYLDYINLMTYDLHGGWDP--ATSHHTAVYSVDSTVKLYLNNGVPAEKLMVGGAFYSRVWQNVENKGTGLSEKA-GSQ------AGSPGTIVYSELVNNYNKNGYTRYWDDTAKAPYL-FNGS----TFISYEDTASAAYKAEYIKQNNLAGFMYWEYSQDSDSHEL-----ANTIYSRLYAKSGTP | |||||||||||||
7 | 5y2aA | 0.21 | 0.17 | 5.54 | 2.70 | FFAS-3D | -------------------------------------------INPELCTHI----IYAFAVLDKEELVIKSHDIWL-----DVENKFYEKVTALKSHGVKVLLGLGGYSRLVNNVSARRKFVVHAVDFLEQYGFDGLDLDWEYPKCWQDSDKQGFADLVKELRKAFNRR--GMLLSAAVSASKRV-IDYAYNVPALSMNLDWISLMTYDYHGQWDK--KTGHVAPMYVVNFTVNYWINKGADRKKLVVGVPFYGQSFSVVEGAGTGLGAPTYAGGEAGDETRARG-FLSFYEICERVKVKGWKVHRDPGGRIGPYATHDD----QWVSFDDDFMARHKAEYVRAMELGGSMAWSLDLDDFTGKYCGCGKAP-LLTTINHVLRGK | |||||||||||||
8 | 4s3jA | 0.14 | 0.13 | 4.41 | 0.98 | EigenThreader | SGDSVYSLASKYGSTPDEIVKDNYRISQTYNASLAKVNNLSLKSIL--HVGQPKGTKRSSIAYLQPSTIPTRAINPFLTYLAYFSFETAKIANIATQGQTIPMLVITNTSVILRDATIQNKFITNILQTAEKYGMRDIHFDFESVA---PEDREAYNRFLRNVKIRLP---SGYTLSTTLVPKTSSNQKEAHDYKAQGQIVDFVVIMTYDWGWQGGP---PMAISPIGPVKEVLQYAKSQMPPQ-KIMMGQNLYGFDWKL-----------------PFKQGNPPAKAVSSVAAVALARKYNVPIRYDFTAQAPHFNYFDENGVQHEVWFEDARSIQSKFNLMKEQGIGGISYWKIGLPF----------PQNWRLLVENFTITK | |||||||||||||
9 | 3alfA | 0.19 | 0.15 | 4.86 | 2.40 | CNFpred | ---------------------------------------------------------NVKGGYWFKDSGLANIDSTLFTHLFCAFA-FRQFTSTVQRPSVKTFLSIA-YGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLS--AADMTNLGTLLNEWRTAINTEAAALLLTAAVSNSPRVN-GLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFSGSDGINAWIQAGVPTKKLVLGIPFYGYAWRLVNANIHGL----RAPAAGKSNVGAVDGSMTYNRIRDYIVESRATTVYNATIVGDYCYSG-----SNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQN----------WGLSRTASQTWGVS | |||||||||||||
10 | 4txgA | 0.17 | 0.14 | 4.63 | 1.33 | DEthreader | ---------------------------------------------V---QLANGS-RRRIIGYFTSWRLASDIPWSKLTHINYAAVAFNLLTQYKRKYPVKTLISVGTGYSMTVNQAGINAFSDSAVAFLRKYGFDGVDIDFEYPTSMLGSLNKGYVALLQTLRDRLDRAAAYYQITAAVPASGYLL-RGMETFQ-GLKYLDFVNVMSYDLHGAWNR-F-VGPNAALYNTDWAYHYYRG-GLPASRVNMGVPYYTRGWKNVSGG-SNGLWGS-SVGSGDGAVEIPGGSNPMWHAKNLEKGGSYQRNYNGALAAPWLWNA---GKKVFLSTEDEQSIAQKAAWIDANNVGGVMFWELAGDYDWKRN-EYFIGTTLTSLLYNTFSQP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |