Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHSSSHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MTMSSFLINSNYIEPKFPPFEEYAQHSGSGGADGGPGGGPGYQQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTAREPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQPQLPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGPPGKAQTQSPHLHPHPHPSTSTPVPSSI |
1 | 5jcss | 0.10 | 0.09 | 3.39 | 1.47 | SPARKS-K | | KRELTIPSRGETVKAANGFQLISTVRINEDHQKDSSNKIYNLNEPSEEDLTHILAQKFPILTNLIPYMNTKFISLNKGAHTRVVSLDILFKNNGINKPDQLIQSSVYCFAGAIGEFKALEPSLDIASSRISLFLTQHVPTLENLDDSIKIGLKEKLNIQKKSMNS--TLFAFTNHSLRLMEQISVCIQMTEPVLLVLAKKLTVINVSQQTETGDLYKPKTVAVP---IQENFETLFNATFSLKKNEKLHRCFN-------------KNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWA |
2 | 1l5gA | 0.05 | 0.05 | 2.35 | 1.39 | MapAlign | | VLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVADVFIGAPLFMDEVGQFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGSMPPSFGYSMKGATDIDKNGYPDLIVGAF |
3 | 1gt0C | 0.20 | 0.08 | 2.70 | 1.64 | HHsearch | | ------------------------------------------------------------PSDL---EEL-EQFAKFKRIKLGFT------------------QGDVGLA-----------MGKLYGNDFSQTT-ISR------------------FEAL-----------------N---LSFKNMSKLKPLLEKWLNDAENL------GLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFSNRRQKEKR------------------------------------------------ |
4 | 1l5gA | 0.07 | 0.06 | 2.64 | 0.97 | CEthreader | | QPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIF----DDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDF----------QTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYI |
5 | 6v9iC | 0.07 | 0.07 | 2.93 | 0.60 | EigenThreader | | FSDVHAVCLWDDKPKPFCQLEITLNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNP--EDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGLETRRECNVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDELLANYCDMLLRVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSN |
6 | 2cueA | 0.36 | 0.09 | 2.60 | 0.80 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGSSGQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQSGPSS--------------------------------- |
7 | 1w0rA3 | 0.11 | 0.08 | 2.96 | 1.41 | SPARKS-K | | -----------------VCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCPVAGGWGPWGPVSPCPVTCGL-GQTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGRTCRGRKFDGHR--CAGQQQ-----------DIRHCYSIQHCPLKGSWS--------------------------------------------EWSTWGLGPNPTRARQRLCTPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEELQ |
8 | 1fjlA | 0.36 | 0.07 | 2.14 | 0.78 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTSVS------------------------------------------ |
9 | 3btaA | 0.04 | 0.03 | 1.41 | 0.67 | DEthreader | | -FEESLE----VFKVNYEMS-GLEVSFEELRTFGGDAFIQE-F--Y-----------------------TLNKAKSISLYMKNVFKEKYLL--SEDTSGKF------SV----------D------------F-KLKMLIYTEDNRNFDKANGLEFEHGKSRIALTN-VNEALSRVYTVVNKWVQLVDFETYIGIGFVGAL--ALEQAKNIDSKLESIKANINKFLNQCSVSY-LM-----------------------------NSMIPYGVKRLEDFALKDALLKYIYDNRGTLIG-----------------QVDRL |
10 | 4ui9A1 | 0.05 | 0.04 | 2.02 | 1.24 | MapAlign | | DEELYVAGNMVIWSKGSKSQALILQSSCINMHSIEGKDYIASLPFQVANVWPTKYGLLFERSPLPTMFSMLHPLDEITPLVCKVQYVVDHAMKIVFLNTDPSIVMTYDAVQNVHSVWTLRRVKSEEENVVLKFSEQGGFPQNVPIVPELCIDHLWTNSQASKVFITSDLCGQKFLCVEKIDTMLVLEGSGNLVLYTGVVRVGKVIRDPVHNRVTLELPEIATSELVQTCLQAIKFILAVQMLVKWYNVHSSYHSEWNLFVTCLMNMMGY--------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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