Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGMRFQVYLPWDEAVDSAFFSGFLSFWSYIIILNTVVRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFLRLNL |
1 | 6rohA | 0.24 | 0.23 | 7.03 | 1.33 | DEthreader | | FSKWVLKLAISMIQAAH-----VGVGISGMEG--MQAARSADI----A--V--G----QFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYFALNMHGELADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPHANI--SREYYGVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRYE |
2 | 7ky5A1 | 0.26 | 0.25 | 7.70 | 2.82 | SPARKS-K | | CCRVSPAQKAAVVKLVKKTDVMTLAIGDGS--NDVAMIQSVGIAGEEGRQAVMCSDYGQFRYVTRLVLVHGKWCYKRLAEMIPQFFYKNVIFTLSLFWYGIYNNFDGSYLFEYTYLTFYNLAFTSVPVILLAVLDQDVSDTVSMLVPQLYRVGILRKEWNQTKFLWYMLDGVYQSVICFFFPYLAYHKNMVENGLGLDHRYFVGVFVTAIAVTSCNFYVFMEQYRWDWFCGLFICLSLAVFYGWTGIWTSSSSSNEFYK------GAARVFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIF |
3 | 6lcpA | 0.22 | 0.21 | 6.71 | 1.63 | MapAlign | | --ADMRRETAQHLEMFAVEGLRTPDTIALLADAGIKLWVLTGDKVETAINIGFSCNLGQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGVLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVPTAAGNGLDVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTYS------AGFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQ- |
4 | 6lcpA4 | 0.24 | 0.23 | 7.16 | 1.15 | CEthreader | | RLQDGVPDTIALLADAGIKDVMTLSIGDG--ANDVAMIQEVGIAGEEGRQAVMSSDFAQFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGVLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVLTAAGNGLDVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTYSA------GFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQR |
5 | 6rohA3 | 0.27 | 0.26 | 8.07 | 1.79 | MUSTER | | RVSPLQKALVVKMVKRK-SSSLLLAIGDGA--NDVSMIQAVGISGMEGMQAARSADIGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYGFALNHGELADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYAS--IFPHANISREYYGVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRMY |
6 | 6rohA3 | 0.26 | 0.26 | 7.98 | 3.33 | HHsearch | | LEDYLPLQKALVVKMVKRKSSLLLAIGDGA--NDVSMIQAVGISGMEGMQAARSADIGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYGFANMHGELADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPH--ANISREYYGVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRMY |
7 | 6k7gA4 | 0.29 | 0.22 | 6.67 | 2.17 | FFAS-3D | | ------------------------------------------------------------------------WNYNRVSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSL--WPAIPMAPDMSGEAAMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTA |
8 | 6lknA1 | 0.21 | 0.21 | 6.53 | 1.85 | EigenThreader | | RLHELLIEYRKKLLHEFQEYGLIIDGSTLSLILNSSQDSSSNNYKSIFLQICMKEGRQAARNSKKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFF--CGFS----QAYLTMYNICFTSLPILAYSLLEQHINIDTLTSDPRLYMKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFLFQTASLEENGKVYGNWTFGTIVFTVLVFTVTLKLALDTRFWINHFVIWGSLAFYVFFSFFWG----GIIWPFLKQQRMYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVLKNVR |
9 | 6lcrA | 0.24 | 0.23 | 7.14 | 2.17 | CNFpred | | ------AQKAAVVSMVKNGDVMTLSIGDGA--NDVAMIVGVGIAGEEGRQAVMSSDFAIFRFLQRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDIAYIFEYTYILMFNLFFTSVPVILMGVLDQDVSDTVSLAVPQLYRRGIERKEWTQTKFWLYMIDGVYQSVMSFFIPFIFVVLTPTAAGLDVSERTRLGAYIAHPAVITINGYILINTYRWDWLMLLSIVLSDVFIFFWTGVYTATTY------SAGFYQAAPQVYQELTFWMCLIVTPALCLLPRLVVKCIQKQR |
10 | 6rohA3 | 0.24 | 0.23 | 7.03 | 1.33 | DEthreader | | FSKWVLKLAISMIQAAH-----VGVGISGMEG--MQAARSADI----A--V--G----QFKFLKKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYFALNMHGELADHWSWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPHANI--SREYYGVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRYE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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