>P86790 (179 residues) MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIR NVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKP VIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTL |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTL |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCSSSSSSSCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC |
Confidence | 98888898889975565534652469999959999985530222899828999989999998699999999985399999618995581799996159979999951565566667887411135010487999999999999999854758899875399999999999999999729 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTL |
Prediction | 74345445474455554441313031000001633676653452000001772534431430110200120054047753153041452320023124301000003234354556545433414454033410341044004103023130341166541630362045104401655 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCSSSSSSSCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTL | |||||||||||||||||||
1 | 5lddB | 0.26 | 0.22 | 6.88 | 1.17 | DEthreader | ---------------I--I-PAQLGFLAIYNPALGTTDETLEDQIVYYATTVSERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLP---------YEYSSREVPPSLLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
2 | 5lddB | 0.26 | 0.22 | 6.88 | 2.53 | SPARKS-K | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYATASTERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLPY---------EYSSREVKPSLLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
3 | 5lddB | 0.26 | 0.22 | 6.73 | 1.47 | MapAlign | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYATASTERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRL---------PYEYSSREVKPSLLRADLLRAYDLFLLHHSSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
4 | 5lddB | 0.26 | 0.22 | 6.88 | 1.52 | CEthreader | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYATASTERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLP---------YEYSSREVKPSLLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
5 | 5lddB | 0.26 | 0.22 | 6.88 | 1.93 | MUSTER | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYATASTERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLPY---------EYSSREVKPSLLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
6 | 5lddB | 0.26 | 0.22 | 6.88 | 6.54 | HHsearch | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYATASEERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLP---------YEYSSREVKPPSLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
7 | 5lddB | 0.25 | 0.22 | 6.74 | 2.26 | FFAS-3D | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYATASTERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLPYE--------YSSREVKPPSLLRADLLRAYDLFLLHHGSSLSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
8 | 5lddB | 0.24 | 0.20 | 6.28 | 1.47 | EigenThreader | ------------------IIPAQLGFLAIYNPALGTTDETLEDQIVYYALSPVSKEERHERLRQAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLPY--------EYSSREVKPPSLLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
9 | 5lddB | 0.27 | 0.22 | 6.70 | 1.60 | CNFpred | ----------------------QLGFLAIYNPALGTTDETLEDQIVYYATA-EERHERLRQIGLAQGMVEFAKSFSDGEPVDTIDTEKARVILVEVEEGWWILASIDLTRLP---------YEYSSREVKPSLLRADLLRAYDLFLLHHGSLSSLLASQGRAQLVASLTRFWDHFLATW | |||||||||||||
10 | 1w63Q | 0.07 | 0.05 | 2.03 | 1.00 | DEthreader | ----------------------MMRFMLLFSRQGK--------LRLQKWYLATSDKERKKMVRELMQVVLARK----PKMCSFLEWRDLKVVYKR-YASLYFCCAIEG-------------------QDNELITLELIHRYVELLDKYFGVCELDI----I-FNFEKAYFILDEFLMQD | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |