>P82912 (194 residues) MQAVRNAGSRFLRSWTWPQTAGRVVARTPAGTICTGARQLQDAAAKQKVEQNAAPSHTKF SIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNA KKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTP IPHNGCRPRKARKL |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MQAVRNAGSRFLRSWTWPQTAGRVVARTPAGTICTGARQLQDAAAKQKVEQNAAPSHTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL |
Prediction | CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCSSSSSSSCCCCCHHHHHHHHHHCCCSSSSSSSCCCCCCCCCCCCCCCCC |
Confidence | 96422203455443116787664235665542235531022311233210012556332234787654320000156433437379999448866999985999989998278530489876878999999999999999929929999996899887999999998298899999778899999999998999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MQAVRNAGSRFLRSWTWPQTAGRVVARTPAGTICTGARQLQDAAAKQKVEQNAAPSHTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL |
Prediction | 44234432432141243354473435544454244545416654555534564455445353445446754544456364462110003014310000001354422020102224146465433200220043005203734053030203233422410020035360402304230324263434645458 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCSSSSSSSCCCCCHHHHHHHHHHCCCSSSSSSSCCCCCCCCCCCCCCCCC MQAVRNAGSRFLRSWTWPQTAGRVVARTPAGTICTGARQLQDAAAKQKVEQNAAPSHTKFSIYPPIPGEESSLRWAGKKFEEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLSAMHGLIMGGLEVISITDNTPIPHNGCRPRKARKL | |||||||||||||||||||
1 | 3j6vK | 0.80 | 0.70 | 19.66 | 3.35 | SPARKS-K | -------------------------AGVPAPTIHMSAQQMQDAAAKEEVEKAETPAPAPFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL | |||||||||||||
2 | 3bbnK | 0.38 | 0.23 | 6.87 | 0.83 | DEthreader | ---------------------------------------------------------------------------SARKIP-KGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV | |||||||||||||
3 | 3j6vK | 0.81 | 0.71 | 19.94 | 2.71 | MUSTER | -------------------------AGVPAPTIHMSAQQMQDAAAKEEVEKAEAPSRSSFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL | |||||||||||||
4 | 1i94K | 0.38 | 0.20 | 5.96 | 1.05 | MapAlign | -----------------------------------------------------------------------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTP-------------- | |||||||||||||
5 | 3j6vK | 0.80 | 0.70 | 19.80 | 3.85 | HHsearch | -------------------------AGVPAPTIHMSAQQMQDAAAKEEVEKAETPSRSSFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL | |||||||||||||
6 | 1i94K | 0.39 | 0.24 | 7.16 | 0.85 | CEthreader | -------------------------------------------------------------------------KKKVKRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRK | |||||||||||||
7 | 3j6vK | 0.80 | 0.70 | 19.66 | 2.10 | FFAS-3D | -------------------------AGVPAPTIHMSAQQMQDAAAKEEVEKAETPAPSSFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL | |||||||||||||
8 | 5xxbD | 0.17 | 0.13 | 4.24 | 0.77 | EigenThreader | -------------------VKAL---KNKAYFKRYQ----------------VKYRRRRQGKTDYAARRALVLQDRNKYNAHKHRLVVRLTNKRIICQVVYSIEGDLATAESTEYGVKIGLTN-YAAAYCTGLLLARRVLKQLGFKVLLDVGIVGNRVFGAMKGAADGGLHV--------PHGIKKFPGYSYDP | |||||||||||||
9 | 3j6vK | 0.83 | 0.69 | 19.48 | 1.62 | CNFpred | -------------------------------TIHMSAQQMQDAAAKEEVEK-PAPSRSSFSIYPPIPGQESSLRWAGKKFEEIPIAHIKASYNNTQIHVVSAAHQPLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKGVTHVRVVVKGLGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARRL | |||||||||||||
10 | 5li0k | 0.44 | 0.27 | 7.85 | 2.78 | SPARKS-K | --------------------------------------------------------------------------RRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNGCRPPKRR-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |