Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCSSSHHHHHHHHHHCCCCCCCCCCSSCCCCCCCCSSSSSCCCCSSSSSSCCCCCCCCCSSSSSSSSSCCCCSSSSSCCCSSSSSSSCCCCSSSSSSSSSSSCCCCCCCCCSSSSSSCCCCCCCCCCCCCSSSSCCCCSSSSSSSCCCCCCCCSSSSSSSSSCCCCCCSSCCCSSCCCCSSSSSSSCCCCCCCCCSSSSSSSSSSCCCCCCCCCCSSSCCCCCCCCCCCCCSSSSSSCCSSSSSSCCCCCCCCCSSSSSSSSSSCCCCCSSSSSSSCCCCCCCCSSSCCCCSSSSSSCCCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCHHHCCCCCCCSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCCC MEWPARLCGLWALLLCAGGGGGGGGAAPTETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKRNSTLYITMLLIVPVIVAGAIIVLLLYLKRLKIIIFPPIPDPGKIFKEMFGDQNDDTLHWKKYDIYEKQTKEETDSVVLIENLKKASQ |
1 | 3f83A | 0.04 | 0.03 | 1.38 | 0.83 | DEthreader | | -------------------------KNPGSENMTNTIGPHDRG----GSSPIYNILNSYLGETNITLQFTEKRSLIKRELELNKLPFG-----GVWNAVLKLNVKGTYTINITVNLTDKNIQIWLPQFARVDLNLRPTGGTYIGRNSVD-MCFYLIRFDFYLKKIDDSKELVYTLSLLLAGRLQLDAKVKNPE---A-GQYMGNIKITFTVEKNITVTAS-VDPVIDLLALPAVKLAYSSKTFESYRVMTQVHTNAVIVKLTPQLTDNSTQMPISVSWGGQALGY-----SSQELVISAAPSAPTANYSGVVSLVMTLGSDN-KQVEK-NI-TVTASVDPVI------------------------------------------------------------------------------------- |
2 | 3bpnC | 0.98 | 0.67 | 18.90 | 2.01 | SPARKS-K | | -----------------------------ETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQH------SVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQ--------EAKCEENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK----------------------------------------------------------------------------------------- |
3 | 5e55A | 0.12 | 0.08 | 2.81 | 0.79 | MapAlign | | -----------------------------SPPGPPEDVKVEHISSTTSQLSWRPGPDNN--SPIIFTIQTRTPFSWQAVTYNATVVGLSPWVEYEFRVVAGNNI---GIGEPSKPSLLRTKASVPNVAPGNINGGGGSRSELVITWEAILQNGEGFGYIVMFRPVGTTAWMKE-RVAL-VESSKFIYRNESIM--PLSPFEVKVGVYNNEGEGSLSVTIVYSGE-DEPLAPRGTSVQSFASEMEVSWNAIAWNTGRVLGYEVLYWTDNESMIGKIRVSG-------------NVTTKNITGLRANTIYFASVRAYNTA-------GTGPSSLPVNVTTK---------------------------------------------------------------------------------------- |
4 | 5e4sA | 0.12 | 0.08 | 2.81 | 0.54 | CEthreader | | ------------------------------PPGPPEAVTIDEITDTTAQLSWRPG-PDNHSPITMYVIQARTPFSVGWQAFTATVVGLNPWVEYEFRTVAANVI--GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVLQNGRGFGYVVAFRPHGKMIWMLTVLASAD----ASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTLVYSAEEEPTKPPASIFARSSATDIEVFWASPIG-RGRIQGYEVKYWRHDDKEENAKKIRT-----------VGNQTSTKITNLKGSALYHLSVKAYNSAG-------TGPSSATVNVTTRK--------------------------------------------------------------------------------------- |
5 | 3bpnC | 1.00 | 0.69 | 19.28 | 1.66 | MUSTER | | -----------------------------ETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQ------HSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCE--------ENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK----------------------------------------------------------------------------------------- |
6 | 3bpnC | 0.92 | 0.63 | 17.76 | 1.26 | HHsearch | | -----------------------------ETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPERSIEVPLNERICLQVGSQCST--NESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKV------QHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAK--------CEENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK----------------------------------------------------------------------------------------- |
7 | 3bpnC | 0.99 | 0.69 | 19.22 | 2.59 | FFAS-3D | | -----------------------------ETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQ------HSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCEE--------NTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK----------------------------------------------------------------------------------------- |
8 | 3bpnC | 0.95 | 0.65 | 18.26 | 1.03 | EigenThreader | | -----------------------------ETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVQH----SVQIMVKDN--AGKIKPSFNIVPL--TSRVDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCE--------ENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGK----------------------------------------------------------------------------------------- |
9 | 5e4eC | 1.00 | 0.71 | 19.87 | 3.42 | CNFpred | | -------------------------------QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTK------EQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR--------------------------------------------------------------------------------------- |
10 | 4oi9A | 0.07 | 0.04 | 1.83 | 0.83 | DEthreader | | ---------------------------RTFQRPDRVELMPLPWQPVNFTLSCRVPGAGPR-ASLTLTLLRG---AQELIRLTATVLARREDHGANFSCRAELDLRPGLFENSSAPRELRTF--SLSPDAPRLAAPLLEVGSRPVSCTLDGLFASEARVYLALG-------DQNLSPDVTLFVATATATASAEQ---EGARQLVCNVTL-GGENRETRENVTIYS-FPAPLLTLSEPVSEGQ-MVTVTCAA-G--AQALVTLE-----------GVPAAVPGQ-----------PAQLQLN-A-TENDDRRSFFCDATLDVDGETLIKNR-SAELRVL-Y--APR----------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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