Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSYPQFGYPYSSAPQFLMATNSLSTCCESGGRTLADSGPAASAQAPVYCPVYESRLLATARHELNSAAALGVYGGPYGGSQGYGNYVTYGSEASAFYSLNSFDSKDGSGSAHGGLAPAAAAYYPYEPALGQYPYDRYGTMDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYAEGEEEEGGEEEAREEPLKSSKNAEPVGKEEKELELSDLDDFDPLEAEPPACELKPPFHSLDGGLERVPAAPDGPVKEASGALRMSLAAGGGAALDEDLERARSCLRSAAAGPEPLPGAEGGPQVCEAKLGFVPAGASAGLEAKPRIWSLAHTATAAAAAATSLSQTEFPSCMLKRQGPAAPAAVSSAPATSPSVALPHSGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPLGRSLGAGANVLTAPLARAFPPAVPQDAPAAGAARELLALPKAGGKPFCA |
1 | 5jcss | 0.07 | 0.07 | 2.72 | 1.31 | SPARKS-K | | LTIPSRGETVKAANGFQLISTVRI----NEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILA-----QKFPILTNLIPKLI------DSYKKSIYMNTKFISLNKGAHTRVVSVR---DLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADGAIGEFKALEPIIQAIGESLDI--------------ASSRI-----SLFLTQHVPTLENLDDSIKIGRAVLLKKKSMNSTLFAFTNHSLRL-MEQIVCIQMTEAKMLAKKLTVNVSQQTETGDLLGGYKPKTVA--VPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAK-------KKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVESLVKTIRAGESDLLTEPDSREPIKAHPDFRKRDLPMGIRS-RFTEIYVHSPERDITDLLSIIDKYIGKYSVSDE---WVGNDIAELYLEAKKLSDNNTIV |
2 | 1vt4I3 | 0.11 | 0.09 | 3.27 | 1.37 | MapAlign | | GGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---- |
3 | 2lk2A | 0.31 | 0.05 | 1.63 | 2.05 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------MGHHHHH------HS---HMLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDG-----KDPNQFTI--S---------R---------RGA--------KISE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1vt4I3 | 0.09 | 0.08 | 3.07 | 0.89 | CEthreader | | HKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------------------- |
5 | 4bgdA | 0.05 | 0.05 | 2.31 | 0.68 | EigenThreader | | KLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTAGLTSEDLFADGLLQVLVCTALAWGVNLPAHTVIIKGTSPQDVLQMLGRAGRPRYDTFGEGISNVQYYLSVLNQQLPIES------QFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLAS--PMLYKVPDISSDG----------QLKKFRESLVHSALCILKEQELVENDVIEATDLGNIASSFYINHASMDVYNRELDEHTTQIDLFRIFSMSEEFKYVSVRYEEKRELKQLLEKAPIPIREDIDDPLAKVNVLLQSYFSQLKFEGFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRMLLNLCKSATTKMWPTNCPLRQFKTCPVEVIKRLEAS---TVPWGDYLQLNGFKLPKKFPPPTPLLENISISTSELGNFKTFNKIQSQVFESLYNSNDSVFVGSGKGTAMAELALLNHWRQNKGRRWRQRKNIQSLELMIYDDAHEISQGVYGAVYETLISRMIFIATQLEKKI |
6 | 2lk2A | 0.33 | 0.06 | 1.68 | 0.67 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------MGHHHH-HHSHM--------LPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4btgA | 0.12 | 0.11 | 3.82 | 1.24 | SPARKS-K | | ----GFNLKNGSAR--GLTQAFAIGE---LKNQLSVGALQLPLQFTRTFSASMTRLFAGGALSVNPKLTAYITGSPPTAPSEHELFHHITTDVCHVLSPLGFILPDAAYVYRVGRTATYPNFYALRRMLTALSSVDSKMLQATFKAKGAL-APALISQHLANAATTAFERSRGNAVVSSVLTILRLWSPSTLFIAYQDMVKQR--------------GRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETYIGQTSAIDHMGQDWQFAKEITAFTPVKLANNSNQRFL-DVEPGISDRMSATLAPIGNTFA--VSAFVKNRTAVY----EAVSQRGTVNSNGAEMTL-----------GFPSVVERDYAAIAALRTGIVDESLEYAAVMHYAVAHNPEVVVSEHQGVAAEQGSWNVRTELRIPVGYNAIEG----GSIRTP---EPLEAIAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYRYTAEVKEFELLGLGQRRERVRIL |
8 | 4i2wA | 0.09 | 0.06 | 2.22 | 0.67 | DEthreader | | --------------------TAEEIRDEGNAA-----YIKADELY-T-AL--LTTDEDKALRPV-LYR-NRA----ARLKRDDFAQC------DVKAFRRSAREQLGNVGPAFAIVLQRL-V------------KANNDK---IKQ-TTSLANKVTDEKLAFR-G--------E---A--K-------QKTALNNLLVLTARIDDATGIVQETCIDLFLLWSWKFVEER-GLLALLDVASQIPELCYPVSAETRQHVAIC--QRLEEDVRLQGPVGEVARV--ATCKKLLETEKYSIRADSLLLKALVLLAKKAGAL--C------------------------------------LATIYAN---A--FE--K--PK-------------------VEKRVRALVEEGAVFAEYEDL---------T-LCLRLTKEASGEGKI--GHVVKPLCLSLLTLTNLASVS-DSIRGRILKEKILLFFYETPGTDRLKLWYLSASAGF--------------- |
9 | 2pffB | 0.08 | 0.08 | 3.29 | 1.29 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVWLVEIVNYNVE |
10 | 1zvoC | 0.12 | 0.10 | 3.69 | 0.92 | MUSTER | | --------------RLQLQESGPGLVKPSETLSLTSGGPIRRTGYYWG-------IRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMS----AADTAM----ARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCR-HPKDNSPVVLALITGYHPTSVTTWY-----------------MGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGE-----TASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFT--FVVGSDLKDAHLWEVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPWLLCEVSGFSPPNILLM-----LEDQREVNTSGFAPARPPPQPGSTTFWAWSVPAPPSPQPAT--VVSHEDSRTLLNA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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