>P78358 (180 residues) MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGA PRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPG VLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGAPRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPGVLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCHHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSCCSSSSSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCCCCCCCCC |
Confidence | 998999999999888899999999999988889988888999999998888888888888999999888889999888877888873103331279987899999986347877777765336899971988999998367523579999999999999999997488513037887789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGAPRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPGVLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR |
Prediction | 855567457355555647745444744745435545545654524635444444445454364464654444545444446445444142304031435530420241034455254566314340415432010204064332011102202420210040064141211443564678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCHHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSCCSSSSSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCCCCCCCCC MQAEGRGTGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGGAPRGPHGGAASGLNGCCRCGARGPESRLLEFYLAMPFATPMEAELARRSLAQDAPPLPVPGVLLKEFTVSGNILTIRLTAADHRQLQLSISSCLQQLSLLMWITQCFLPVFLAQPPSGQRR | |||||||||||||||||||
1 | 6gwjB | 0.45 | 0.21 | 6.17 | 1.49 | SPARKS-K | --------------------------------------------------------------------------------------PHIFTLSVPFPTPLEAEIAHGSLAPDAEPHQ--RVVGKDLTVSGRILVVRWKAEDCRLLRISVINFLDQLSLVVRTMQRFGPPVSR-------- | |||||||||||||
2 | 6gwjB | 0.45 | 0.21 | 6.17 | 1.00 | MUSTER | --------------------------------------------------------------------------------------PHIFTLSVPFPTPLEAEIAHGSLAPDAEPHQ--RVVGKDLTVSGRILVVRWKAEDCRLLRISVINFLDQLSLVVRTMQRFGPPVSR-------- | |||||||||||||
3 | 6gwjB | 0.45 | 0.21 | 6.17 | 4.06 | HHsearch | --------------------------------------------------------------------------------------PHIFTLSVPFPTPLEAEIAHGSLAPDAEP--HQRVVGKDLTVSGRILVVRWKAEDCRLLRISVINFLDQLSLVVRTMQRFGPPVSR-------- | |||||||||||||
4 | 6gwjB | 0.46 | 0.21 | 6.16 | 1.23 | CNFpred | ---------------------------------------------------------------------------------------HIFTLSVPFPTPLEAEIAHGSLAPDAEPH--QRVVGKDLTVSGRILVVRWKAEDCRLLRISVINFLDQLSLVVRTMQRFGPPVSR-------- | |||||||||||||
5 | 1i7qA | 0.06 | 0.05 | 2.12 | 0.83 | DEthreader | --FHQCGARPATLLLESQSLLVIDEALLVLDHGALEL--PQPIPHQKLENMQL---------------------SCNQEYVVLQQVVPSRRFSLPCAPLGPYQTLKNPASP-AGTRMDEEHHTLIRSAYVRTVQAGAGVVSPEREADETRNKARAVLRAIATAHH--------------- | |||||||||||||
6 | 7jjvA | 0.26 | 0.16 | 4.97 | 1.01 | SPARKS-K | LDGADGTSNGQAGASGLAGGPNCNGGKGGKVGTAGGAGGVGGAGGTGAGGSGGNSDVAAGGAGAAGGAAGGAGTGGTGGNGGAGK-------------------------PGGAPGAGGAGTPAGSAGSPGQTTVL-------------------------------------------- | |||||||||||||
7 | 4gt2B | 0.12 | 0.08 | 2.76 | 0.71 | MapAlign | ------------------------------------------------------------LTSLGSERAMFHGKHQPGITTPMQARGHLVAFDLAAG-RKEAAALLRRWSDTARRLAGPSSLTVTFGRTGGDLWVQIGADDALVAFHALRAIQRDAGAAAQRKLDRGDALSQFIRHEASG | |||||||||||||
8 | 6gwjB | 0.44 | 0.21 | 6.02 | 0.61 | CEthreader | --------------------------------------------------------------------------------------PHIFTLSVPFPTPLEAEIAHGSLAPD--AEPHQRVVGKDLTVSGRILVVRWKAEDCRLLRISVINFLDQLSLVVRTMQRFGPPVSR-------- | |||||||||||||
9 | 3boiA | 0.26 | 0.12 | 3.60 | 0.73 | MUSTER | -CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGV-GGRGGKGGSGTPKGADGAPGAP------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 4wx8A | 0.21 | 0.09 | 3.00 | 3.33 | HHsearch | ------------------------------------------------------------------------------------SLDHTLELKIPFETERQATIATKVLSPDPIL--KPQDFQVDYSSEKNVL-VQFRSIDDRVLRVGVSSIIDSIKTIVEADVLSHH------------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |