Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCSSSSSSCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCSSSSSCCCCSSSSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHSSSSSSSCCSSSSSSSSC MSSNCTSTTAVAVAPLSASKTKTKKKHFVCQKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
1 | 1bo1A1 | 0.94 | 0.76 | 21.25 | 1.17 | DEthreader | | -----------------------------------FRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNLFNKE-NLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPIN-SDSQ---TRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
2 | 1bo1A1 | 0.97 | 0.79 | 22.20 | 4.04 | SPARKS-K | | ---------------------------------KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSD---SQTRF-LTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
3 | 1bo1A | 0.98 | 0.80 | 22.33 | 1.92 | MapAlign | | ----------------------------------LFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINS----DSQTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
4 | 1bo1A1 | 0.99 | 0.81 | 22.74 | 1.38 | CEthreader | | ---------------------------------KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQT----RFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
5 | 1bo1A | 0.99 | 0.81 | 22.60 | 2.27 | MUSTER | | ---------------------------------KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDS---QT-RFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
6 | 1bo1A1 | 0.96 | 0.79 | 22.07 | 4.60 | HHsearch | | ---------------------------------KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPIN---SDSQTR-FLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
7 | 1bo1A1 | 0.95 | 0.76 | 21.39 | 2.74 | FFAS-3D | | ------------------------------------RASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRS----APINSDSQTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
8 | 1bo1A | 0.96 | 0.77 | 21.66 | 1.37 | EigenThreader | | ---------------------------KLFRA------SEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPIDSQ------TRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
9 | 1bo1A | 1.00 | 0.82 | 22.87 | 2.41 | CNFpred | | ---------------------------------KLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQ----TRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
10 | 1bo1A | 0.94 | 0.76 | 21.25 | 1.17 | DEthreader | | -----------------------------------FRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNLFNKE-NLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPIN-SDSQ---TRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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