>P62873 (137 residues) RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI ETGQQTTTFTGHTGDVM |
Sequence |
20 40 60 80 100 120 | | | | | | RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM |
Prediction | CCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCCCCSCCSSSCCCCCCSSSSSSCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCC |
Confidence | 99899578999989999899960899199987778957897758999878999889999899982899199987888986551325746868968999994999599961899299997799948887748897769 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM |
Prediction | 85664422000002534340103233203543163353334051144313030104423230111333102312063465544124305035434403032453210101333101043074343343464675555 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCCCCSCCSSSCCCCCCSSSSSSCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCC RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM | |||||||||||||||||||
1 | 5nrlH | 0.23 | 0.23 | 7.11 | 1.50 | DEthreader | LVSTKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTKLDSHVGKIGAIDWHPDSNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVF | |||||||||||||
2 | 5yzvA2 | 0.27 | 0.26 | 7.85 | 1.78 | SPARKS-K | -GHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDS-TVHLWDVASGE----ALHTFEGHTDWVRAVAFSPDGLLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVH | |||||||||||||
3 | 2h9lA | 0.25 | 0.24 | 7.46 | 0.34 | MapAlign | -GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS----SGKCLKTLKGHSNYVFCCNFNQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV- | |||||||||||||
4 | 5nnzB | 0.26 | 0.26 | 7.87 | 0.25 | CEthreader | IGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT----RKCIAKLEGHEGEISKISFNPQNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF | |||||||||||||
5 | 1b9xA | 0.99 | 0.99 | 27.80 | 1.41 | MUSTER | RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM | |||||||||||||
6 | 3dm0A | 0.25 | 0.25 | 7.69 | 0.65 | HHsearch | TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVS | |||||||||||||
7 | 6zwmC2 | 0.21 | 0.21 | 6.71 | 1.93 | FFAS-3D | PEPEVSITSAHIDPDASYMAAVNSTGNCYVWNLTGGIPKTKIPAHTRYALQCRFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSSSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKREYGGHQKAV- | |||||||||||||
8 | 6bk8D | 0.19 | 0.18 | 5.90 | 0.43 | EigenThreader | GHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEK----NQIIRDYYGHLSGVRTVSIHPTLLIATAGRDSVIKLWDMRTRIPVITLVGHKGPIN | |||||||||||||
9 | 3sn6B | 1.00 | 1.00 | 28.00 | 2.18 | CNFpred | RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM | |||||||||||||
10 | 4j87A | 0.22 | 0.22 | 6.91 | 1.50 | DEthreader | CGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLKADAIVKFVLEGHDRGVNWCAFHPLPLILSAGDDRLVKLWRMTKAWEVDTCRGHFNNVS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |