Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCSSSSSSSSHHHHHHHCHHHHHHHHHHHHHHHHCC MSGKHYKGPEVSCCIKYFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLAQNLVSDIEAVRASW |
1 | 1qoyA | 0.06 | 0.05 | 2.44 | 1.17 | DEthreader | | ---A-TVVVKNAIETADGALDLYNKYLDQVIPW-QTFDETIKELSRFKQYQASVLVGDKTLLMDSQDKYFEATQTVYEWCGVATLLVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFYFSQKGPLLKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTR |
2 | 6k4jA | 0.29 | 0.28 | 8.44 | 1.38 | SPARKS-K | | -----MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNR--- |
3 | 6k4jA | 0.30 | 0.28 | 8.58 | 0.82 | MapAlign | | -----MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFQTKSIFQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWVIEFYETLKAIHYALGGGVEQFISDICPKKLESCPDAIKEVFAVGIGIAVVMIFGMIFSMILCCAIRRN---- |
4 | 6k4jA | 0.29 | 0.28 | 8.44 | 0.77 | CEthreader | | -----MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQENNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLESCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNR--- |
5 | 5tcxA | 0.31 | 0.26 | 7.73 | 1.02 | MUSTER | | ----------STKSIKYLLFVFNFVFWLAGGVILGVALWLRH------------PNTFYVGIYILIAVGAVMMFVGFLGY-GAIQQ---LLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDHQKIDDLFSGKLYLIGIAAIVVAVIMIFEMILSMVLSSGIRN----- |
6 | 6k4jA | 0.29 | 0.28 | 8.44 | 3.71 | HHsearch | | -----MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLESCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNR--- |
7 | 6wvgA3 | 0.27 | 0.18 | 5.52 | 1.74 | FFAS-3D | | -------------LLKYVLFFFNLLFWICGCCILGFGIYLLIHNN---FGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVFLYIGIITICVCVIEVLGMSFALTLN-------------------------------------------- |
8 | 6k4jA | 0.30 | 0.28 | 8.58 | 1.03 | EigenThreader | | -----MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSLKAIHYALNCLAGGVEQFISDISCPDAIKEVFDNKHIIGAVGIGIAVVMIFGMIFSMILCCAIRR----N |
9 | 3rkoB | 0.11 | 0.10 | 3.54 | 0.90 | CNFpred | | -----------TWLADAMAGPTPVSALIHAATMVTAGVYLIAR---THGLFLMT----PEVLHLVGIVGAVTLLLAGFAALVQRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEMGGLRKSIPLVYLCFLVGGAALSALPTAGFFSKDEILAGAMANGHIN |
10 | 6wvgA | 0.23 | 0.22 | 6.80 | 1.17 | DEthreader | | YNMG--MSSL-K-LLKYVLFFFNLLFWICGCCILGFGIYLLHNNFG-V--LFH-N-LPSLTLNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFYEQLNEVALCGIAGTDWGPPCSDVEGCKALWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQI---DKTS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|