Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCSSSSSSSCCCCSSSSSSCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSCCCCSSSSSSSSCCSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSSSSCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSDYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYILQEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEIPRNINIGDLNIKVPNLSQFV |
1 | 1w63Q | 0.39 | 0.30 | 8.88 | 1.17 | DEthreader | | MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLE-W----R-DLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDE--S--P----------------------------------- |
2 | 5mu7B | 0.13 | 0.10 | 3.44 | 1.96 | SPARKS-K | | VVLAASICTRGGKAVLARAFHDIKRSRVEALLASFPKAANSGTQH--------TTVEQDNVRFVYQPLDELYMVLITNKQSNILQDIDTLHLFAQVVTNTCRTLEEREILRNAYELISAFDEIINLGYRENLTINQIKTFLEMESHEERIQEIIARNK----------------------------------- |
3 | 2hf6A | 0.21 | 0.15 | 4.76 | 1.39 | MapAlign | | TVKAILILDNDGDRLFAKYYDTYSVKEQKAFEKNIFNKTHRT---DSEIAL---LE---GLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALR------------------------------------------------- |
4 | 5mu7B | 0.13 | 0.10 | 3.58 | 1.20 | CEthreader | | VVLAASICTRGGKAVLARAFHDIKRSRVEALLASFPKAANSGTQ--HTTVEQ------DNVRFVYQPLDELYMVLITNKQSNILQDIDTLHLFAQVVTNTCRTLEEREILRNAYELISAFDEIINLGYRENLTINQIKTFLEMESHEERIQEIIARNK----------------------------------- |
5 | 1w63Q | 0.36 | 0.28 | 8.32 | 2.00 | MUSTER | | MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMC------SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP--------------------------------------- |
6 | 1w63Q | 0.36 | 0.28 | 8.32 | 3.48 | HHsearch | | MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMC------SFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP--------------------------------------- |
7 | 1w63Q | 0.36 | 0.27 | 8.18 | 2.12 | FFAS-3D | | MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCS------FLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDES---------------------------------------- |
8 | 1w63Q | 0.38 | 0.29 | 8.60 | 1.42 | EigenThreader | | MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWR------DLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDESP--------------------------------------- |
9 | 4p6zS | 0.38 | 0.29 | 8.59 | 1.53 | CNFpred | | MMRFMLLFSRRGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWR------DLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQEEDE----------------------------------------- |
10 | 2jktI | 0.39 | 0.29 | 8.57 | 1.17 | DEthreader | | MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVE-FR---N--FKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSL---E------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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