>P58876 (126 residues) MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT KYTSSK |
Sequence |
20 40 60 80 100 120 | | | | | | MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC |
Confidence | 989878888876543334455667766544555542046788999986237888538899999999999999999999999986178998389999889986629999999998889998750269 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK |
Prediction | 847567646566554654465656776544554555403210220034136734124401420231144214410440242143473442444302200300012400420234134114424658 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK | |||||||||||||||||||
1 | 4khaA | 0.69 | 0.58 | 16.48 | 1.00 | DEthreader | ---------DKLDVL-NDPIL-KTK--TRPVNWSVISYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVEGTKA--KY----- | |||||||||||||
2 | 1kx5D | 0.92 | 0.89 | 24.97 | 2.49 | SPARKS-K | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
3 | 2f8nG | 0.20 | 0.15 | 4.81 | 0.66 | MapAlign | ---------------------------TSRSAKAGVIFVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVAND--EELNQLLKGVTIASGGVL---- | |||||||||||||
4 | 4khaA | 0.70 | 0.69 | 19.63 | 0.59 | CEthreader | EGPLNLNWSVIMKTVTANPHQFFLDGGWGFLQNDSESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA- | |||||||||||||
5 | 1kx5D | 0.92 | 0.89 | 24.97 | 3.11 | MUSTER | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
6 | 1kx5D | 0.92 | 0.89 | 24.97 | 3.45 | HHsearch | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
7 | 1kx5D | 0.92 | 0.89 | 24.97 | 2.39 | FFAS-3D | ----AKSAPAPKKGSKKAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
8 | 1kx5D | 0.80 | 0.75 | 21.07 | 0.83 | EigenThreader | ---------AKSAPAPKKGSKKAVTKTKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
9 | 6w4lA | 0.95 | 0.68 | 19.15 | 1.01 | CNFpred | -----------------------------------ESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK | |||||||||||||
10 | 6xjbA | 0.07 | 0.06 | 2.33 | 0.83 | DEthreader | --DTFNLELKVGHAVGGIVAVTGRVFNVVHPEFFAGLLQAITINSLKHVLDPTEFQAADLQNYVHNMFDLIYMMEYLEGQSIVKLSQKASRESAVHKLKRA-IF-KAY-D---------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |