Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCSCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCC MGEHPSPGPAVAACAEAERIEELEPEAEERLPAAPEDHWKVLFDQFDPGNTGYISTGKFRSLLESHSSKLDPHKREVLLALADSHADGQIGYQDFVSLMSNKRSNSFRQAILQGNRRLSSKALLEEKGLSLSQRLIRHVAYETLPREIDRKWYYDSYT |
1 | 6u2mA2 | 0.14 | 0.14 | 4.75 | 1.32 | SPARKS-K | | --IPRLDTLILVKAMGHRKRFGNPFRPRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKEIREAFRVFKDGNGYISLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ |
2 | 3u0kA2 | 0.17 | 0.16 | 5.41 | 1.14 | MUSTER | | -----MVDSSRRKWNKTGHAVRAIGRLSSALTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKIREAFRVFDKDGNGYISLRHVMTNLGEKLTDEEVDEMIREADIDG-DGQVNYEEFV |
3 | 1tnwA | 0.19 | 0.16 | 5.32 | 1.21 | FFAS-3D | | ------------------SMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMEEELANCFRIFDKNADGFIDIEELGEILGEHVIEEDIEDLMKDS-DKNNDGRIDFDEF- |
4 | 4tncA | 0.17 | 0.15 | 4.78 | 1.03 | CNFpred | | -----------------------QAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ-ADCFRIFDKNADGFIDIEELGEILREHVTEEDIEDLMKDSDKNNDGRIDFDEFLK |
5 | 4n5xA | 0.15 | 0.10 | 3.40 | 1.00 | DEthreader | | ------------------------------------TRYETLFQALDRNGDGVVDIGELQEGLRNLGIPLGQDAEEKIFTTGDVNKDGKLDFEEFMKYLKDHEKKMKLAFKSDKNNDGKIEA-EIS-ILSIDVDGVDWNEWRD--------------- |
6 | 3u0kA2 | 0.16 | 0.15 | 5.05 | 1.28 | SPARKS-K | | --------MVDSSRRKWNKTGHAVRAISSALTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMAEEIREAFRVFDKDGNGYISLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ |
7 | 3siaA | 0.14 | 0.13 | 4.53 | 0.58 | MapAlign | | --------WMGAACIYQSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFLAYNLFVMNARARSGTLEILPALQQLGFYINQRTSLLLHRLFAMAFCDLNCWIAIC- |
8 | 3siaA | 0.12 | 0.12 | 4.25 | 0.38 | CEthreader | | PIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMEYNLFVMNARARSGTLEPHEILPALQQLINQRTSLLLHRLFAMAFCDLNCWIAICA |
9 | 6hcsA | 0.19 | 0.16 | 5.09 | 1.12 | MUSTER | | ----------------------------DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKIREAFRVFDKDGNGYISAAELRHMTNEKLTDEEVDEMIREADIDG-DGQVNYEEFV |
10 | 3evuA | 0.18 | 0.16 | 5.16 | 0.87 | HHsearch | | DGNILGHK--L---------------EYNTLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARMSEEEIREAFRDGNGYISAAELRHVMGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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