Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSSSCCCSSSSSCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCHHHHHHHHHHHHCCCSSSSSSCCCCCHHHHHHHHCCCCCSSSSSCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSCCCCSSCCCCCCSSSSSSSCCSSSSSCCCCCSSCCSSSCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCSSSSSCCCCCCCCSSSCCCCCCCCC MVAERSPARSPGSWLFPGLWLLVLSGPGGLLRAQEQPSCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGIINSILAQSCTEILELQPSSVCVGEEFQIVLSGRGFMLGSRNGSVLCTYTVNETYTTSVKPVSVQLNSMLCPAPILNKAGETLDVSVSFNGGKSVISGSLIVTATECSNGIAAIIVILVLLLLLGIGLMWWFWPLCCKVVIKDPPPPPAPAPKEEEEEPLPTKKWPTVDASYYGGRGVGGIKRMEVRWGDKGSTEEGARLEKAKNAVVKIPEETEEPIRPRPPRPKPTHQPPQTKWYTPIKGRLDALWALLRRQYDRVSLMRPQEGDEVCIWECIEKELTA |
1 | 3efoB | 0.08 | 0.07 | 2.89 | 1.13 | EigenThreader | | YFQHLDHIGRRLDHY-----------EKPELSLCRKSKPPNPPAFIFMIDVSYSNIKNLVKLICEELKTMLEKIPKSAIRGFITYNKVLHFFNVFLVNYHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAAD---CPGKLFIFHSSLPTAPQTNVYDSLAKDCVAHGCSVTLFLFQYVDVASLGVPQLTGGTLYKYNNFRQQFLNDLRNDIEKKIGFDAIT--------GFRATDFFGGILM-NNTTDVEMAAIDC---------DK----AVTVEFKHDDKLSEDSCAVLYTTISGQRRLRIHNLGLNCSSQCETDALINFFAKSAFKAVTAHMLACYRKNCASPSAASQLILPDSMKVCVLLSRPEISPQLLPIHTLDVKSTMLPAAVRCSESRLSEE--GIFLLANGLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQ--------KRPYSMKLTIVKQREQP |
2 | 3n2nF | 0.58 | 0.22 | 6.23 | 1.60 | FFAS-3D | | -----------------------------------SMACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYEQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSILKKSC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 2ok5A | 0.18 | 0.16 | 5.30 | 1.45 | SPARKS-K | | EPSCQDSFMYDTPQEVAEAFLSSLTETIKRKI---VLDPSGSMNIYLVLDGSDSIGANFTGAKKCLVNLIEKVASYKPRYGLVTYATYPKIWVKVSEADSNADWVTKQLNEINYEG-TNTKKALQAVYSMMSWVPPNRTRHVIILMTDGLHNMGDPITVIDEIRDLLYIGLDVYVFGVGLVNQVNINALASKEQHVFKVKD-MENLEDVFYQMIDES-------QSLSLC----------GMVWEHRKGTQPWQAKISVISKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGERDLEIEVVLFINGKKEAGIPEFYDYDVALIKLKLKYGQTIRPICCTGTTRALRLPPTTTCQQQKEELLPAQ---DIKALFVSEEEKKTRKEVYIKNGD----KKGSCERDAQYA------------------PGYDKVKDISEVVTPRF-----LCTGGVSPYDPNTC----RGDSGGPLIVHKRSRFI |
4 | 2xwjI | 0.18 | 0.13 | 4.19 | 1.81 | CNFpred | | ---------------LSSLTETIEGVDAE----------SGSMNIYLVLDGSGSIGASFTGAKKCLVNLIEKVAGVKPRYGLVTYATYPKIWVKVSEASSNADWVTKQLNEINY-SGTNTKKALQAVYSMMSWPGWNRTRHVIILMTDGLHNMGDPITVIDEIRDLLYIYLDVYVFGVGPVNQVNINALASKEQHVFKVK-DMENLEDVFYQMIDESQS-------LSLCGMVWEH-----------YHKQPWQAKISVIRKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGERDLEIEVVLFHPNYN-AGIPEFYDYDVALIKLKLKYGQTIRPICLPCTERALRLPPTTTCQQQKEELLP---AQDIKALFVSEEE-KKLTRKEVYIK-------------------------------------------------------------------------------------------- |
5 | 2ok5A | 0.20 | 0.18 | 5.83 | 3.46 | HHsearch | | LRGSRRTCQEGGSWSGQEVAEAFLSLTETIKR-KIVLDPSGSMNIYLVLDGSDSIGASNFTAKKCLVNLIEKVASYKPRYGLVTYATYPKIWVKVSEADSNADWVTKQLNEINY-EGTNTKKALQAVYSMMSWVPWNRTRHVIILMTDGLHNMGDPITVIDEIRDEDYLD--VYVFGVGPVNQVNINALASKKDHVFKVKD-MENLEDVFYQMIDESQ--SL-----SLC----------GMVWEHRYHKQPWQAKISVIRPGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGERDLEIEVVLFHPNYKEAGIPEFYDYDVALIKLKLKYGQTIRPICCTEALRLPP-----TTTQQKEELLPAQD---IKALFVSEEEKK-LTRKEVYIGDKGSCERDAQYAPG-YDVKDISEVVTPRFLCTGVSP----YADPN----TCRG--DSGGPLIVSRFIQISWGVCKNQKRHARDFHINLFQVL |
6 | 3eh1A | 0.09 | 0.08 | 3.09 | 1.13 | EigenThreader | | NLCYRPEEFMEPHKR-------------PEVQNDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLLPGDSRTRIGMTFDSTIHFYNLLYESKELIKDLLNALPNMTRETHSALGPALQAAFKLMS-----PTGGRVSVFQTQLPLGPATDFYKKLALDCSGQQTAVDLFLLSYSDLASLAMSKYSAGCIYYYPSFAEKLQKDLKRYLTR---------------KIGFEAVMRI--RCTK----GLSMHTFHGN-------FFVRSTDLLSLA--NINPDAGFAVQLSIEESLSLVCFQT-ALLYTSSKVDVQAAICLLANMAVDRSVSSLSAYGSTVMAPSSLKLFPLYVLALLKQKAFRTGTSTRNLYRIDRLTDEGAVHVNDRIVPQPPLQKL--SAEKLTREGWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDS--------RPLSPILHIVKDESPA |
7 | 6admR | 0.58 | 0.22 | 6.23 | 1.56 | FFAS-3D | | -----------------------------------SMACYGGFDLYFILDKSGSVLHHWNEIYYFVEQLAHKFISPQLRMSFIVFSTRGTTLMKLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADSKDHVFPVNDGFQALQGIIHSILKKSC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2i6qA | 0.17 | 0.14 | 4.65 | 1.26 | SPARKS-K | | --------------------------------SKIQIQRSGHLNLYLLLDCSQSVSNDFLIFKESASLMVDRIFSFNVSVAIITFASEPKVLMSVLNDNSRMTEVISSLENANYGTGTNTYAALNSVYLMMNNQMRQEIRHAIILLTDGKSNMGSPKTAVDHIREILNINLDIYAIGVGDVDWRELNELGSKERHAFILQD-TKALHQVFEHML--DVSKL----TDTIC----------GVGNMSANASTPWHVTIKPKSQ--ETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVQWGKEFLIEKAVISVFAKKQGILEFYGDDIALLKLAVKMSTHARPICTMEANLALRRPQGSTCRDHENELLNKQ---SVPAHFVALNG----SKLNINLKMGVEWTSAEVVSQEKTMDVRFLERRFLYNPCLRKRAPRSKVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL--------------------- |
9 | 2ok5A | 0.17 | 0.12 | 4.09 | 1.78 | CNFpred | | --------------VAEAFLSSLTETKRKIVLDPS-----GSMNIYLVLDGSDSIGASFTGAKKCLVNLIEKVAGVKPRYGLVTYATYPKIWVKVSEASSNADWVTKQLNEINYE-GTNTKKALQAVYSMMSW-GWNRTRHVIILMTDGLHNMGDPITVIDEIRDLLYIYLDVYVFGVGPLNQVNINALASKEQHVFKVK-DMENLEDVFYQMIDES---------LSLCG------MVWEHRKGTDYHKQPWQAKISVIRKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGERDLEIEVVLFHPNYN-AGIPEFYDYDVALIKLK-KYGQTIRPICLPCTERALRLPPTTTCQQQKEELLP---AQDIKALFVSEE--KKLTRKEVYIK-------------------------------------------------------------------------------------------- |
10 | 2i6qA | 0.18 | 0.16 | 5.04 | 2.89 | HHsearch | | --------------------------------SKIQIQRSGHLNLYLLLDCSQSVSENDFLFKESASLMVDRIFSFNVSVAIITFASEPKVLMSVLNDNRDMTEVISSLENANNGTGTNTYAALNSVYLMMNNQMWQEIRHAIILLTDGKSNMGSPKTAVDHIREIDYLD--IYAIGVGKVDWRELNELGSKKDHAFILQD-TKALHQVFEHMLDVSK------LTDTIC----------GVGNASDQERTPWHVTIKPKS--QETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDGKEFLIEKAVISPGFDNQGILEFYGDDIALLKLAVKMSTHARPICCTMALRRPQ-----GSTRHENELLNKQS---VPAHFVALNG----SKLNINLGEWTSCAEVVSQEKTMFPNLTVREVVTDQFLCSG------TQEDES----PCKG--ESGGAVFLFRFFQVSWGLCLRRVPPPRDFHINLFRMQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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