>P57737 (353 residues) LGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQAL AVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATDPHSWWAGDNQQV QKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSLTSPST PSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSMRCLRLRQSSLEPVA FRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQPPDMSPVSQAPREA PARRAPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | LGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQPPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD |
Prediction | CCSSSSSSSCCCCSSSSSSCCCCCSSSSSSSCCCCCSSSSSCCCCCCCCCSSSSCCCCCCCCHHHHHHHHHSCCCCCSSSSSSSSSSCHCHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCC |
Confidence | 93364015289997999972789289999838999288721025886542257526445542111333210105892799999985140001011389999999887889986599899627747877778766666667877777656788777898765565556788876678899986666654445555565334542001012356654456642011112322047875413687268875545444689988999868798998628988984441689998755557666777668887664322331467999999999999754102146533355400159 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | LGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQPPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD |
Prediction | 50000000045020000000111001000014762102203414144001000100221021230001000202652020000002333530252011504244131305201416735133020432543565445544455654555554555745555554556454454545654444533543344343444443442442244333244343424544223014136531430102012544520141010324345510120530252654514413042772552454455445645455464466456454245305511550563445045652642457528 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCSSSSSSSCCCCSSSSSSCCCCCSSSSSSSCCCCCSSSSSCCCCCCCCCSSSSCCCCCCCCHHHHHHHHHSCCCCCSSSSSSSSSSCHCHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCC LGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLSAEAWLQGANGQPWLLSLQPPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAMVAKLGNREDPLPQDSFEGVDEDEWD | |||||||||||||||||||
1 | 2aq5A | 0.32 | 0.12 | 3.67 | 1.77 | SPARKS-K | SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV-NKEIARFYKLHERKCEPIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVPPKSR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 2aq5A | 0.21 | 0.16 | 5.21 | 3.76 | HHsearch | TGRVVPAWPHNDN-VIASGSEDCTVMVWEIPDGGLVVITLEG--HTKRVGIVAWHPTAQNVLLSANVILVWDVGTGAVLTLGPDVHPDYVDWSRD------GALICTS------CRDKRVRVIEPRKGTVPVHVFVSEGKTGFSRSERQVALWDTKHLEE-PLSLQELDT-SSGVLLPF----FDPDTNVLCGKGDSSIITSEAPFLHYLSMFSSQRGMGYMPEIARFYKLHERKCEPIAMTVPR-KSDLFQEDLYPPTAG-PDPALTAEEWLGGRDAGPLLISLKDGYVPPKSR---------------------------------------------------------- | |||||||||||||
3 | 2aq5A | 0.32 | 0.12 | 3.67 | 2.53 | CNFpred | -GVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKMEIARFYKLHERKCEPIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVPPKSR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 4ozuA | 0.16 | 0.12 | 4.04 | 3.45 | HHsearch | ASIQDTNFSPFYRDILATACEDTIVRIWQLPEEEPI-ATLTGA--LKKVLSAEWNPAVSGILASGGTVAFWNVEKNNFASV--KFQESLAKWSWK------GDLLACT------TKDKALNIVDPRAAQVVGDGSKACCTIGRDGHVTTGFGKMQEREMADTRKFDKPV-YHAEIDRGSSP--LYPIFDETTGLYVCGKGDSCRYTLRSVDAYRSIKNFCFIPKIGRMLKQEGNVLQPISFIVPRKNQDVFQADLYPPAPD-VEPSMTAEEWFKGENKAIRRRSVKP------------------------------------------------------------------ | |||||||||||||
5 | 4ozuA | 0.26 | 0.09 | 2.88 | 1.56 | SPARKS-K | SSPLYPIFDETTGMLYVCGKGDSSCRYYQYHGGT--LRSVDAYRSSVPIKNFCFIPKLAVDQMRAEIGRMLKQENGVLQPISFIVPRKNQVFQADLYPPAPDVEPSMTAEEWFKGENKAIRRRSVKP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3jroA | 0.13 | 0.10 | 3.56 | 1.03 | SPARKS-K | IGVNSASWAPATSRKFVTGGADNLVKIWKYNSDAQTYVLESTLGHSDWVRDVAWSPTVLL--------------RSYLASVSWTQPWKKTLLFPDVLLS--GNVLALSGGD---------NKVTLWKENLEGKWEPAGEVHI-DNAKLIKERRFTASYTF------AKFSTGSLLTKDIVGKSGVSIKRLPTELQRKFLFDD--------VYLDEIEK--------VTIEARKSNPYPQISESS----------------------LLFKDALDYEKTSYNLWKLSSILFDPVSYPYKTDNDQVKALLKKERHCRLTSWIVSQIGPEIEEKIRNSSNEIEQIFLYLLLNDVVR | |||||||||||||
7 | 4ozuA | 0.27 | 0.09 | 2.87 | 2.23 | CNFpred | --PLYPIFDETTGMLYVCGKGDSSCRYYQYHGG--TLRSVDAYRSSVPIKNFCFIPKLAVDQMRAEIGRMLKQENNVLQPISFIVPRKNQVFQADLYPPAPDVEPSMTAEEWFKGENKAIRRRSVKP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5nd1B | 0.18 | 0.15 | 4.90 | 1.01 | SPARKS-K | ASLFRPAACSAHEWMALMPKVSRPMN-------EPAFREVSDLQMIDRDKGEHFLRQLAQQITVNCTGTAMAIYQAVLGPTGITTTRLQKDLYHHLFQYATTTVQVMQANTRMA--NKMVPPVGLG-------------------------------------------SSMDSFTGPHCATTTGRTLSVYAVDVNHTSSDSAQLEPGLIATATGTGSTITTNVEAAGVVDGGLVTEGHVSLYTTISAQWTEDSSHAD-IVGAEEVKSAVEWLSSNSPGRRAWRLHYDGQIFSNVIARHPYMRRLYTPSELRDARNDLFVVDRIWKIVMAMRGGRHQHSKHYFGEGVMGHGFT | |||||||||||||
9 | 2aq5A | 0.32 | 0.12 | 3.67 | 2.38 | HHsearch | SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK-EIARFYKLHERKCEPIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLKDGYVPPKSR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3jcrL | 0.05 | 0.05 | 2.05 | 0.51 | CEthreader | DRPISYCHFSPNSKMLATACWSGLCKLWSVPD---CNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIAT-----------------GSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE----------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |