>P57737 (260 residues) MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPL QGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGV VLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDG ALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREV KLWDTRFFSSALASLTLDTS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPLQGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREVKLWDTRFFSSALASLTLDTS |
Prediction | CCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSCCCSCCCCCSSSSSCCCCCSSSSSSCCCCCCCCCSSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCCSSSSCCCCSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCSSSSSSCCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCSSSSSSCCCCCCCSSSSSCCCC |
Confidence | 98644443321114568852589710478612843025699529999179997899998144677884156533778987899976999988999608983999960899817502243440787993789998899997999828993999978999388998389997899998899998999808992999988899871443248899820799997999989998178779988999968889952687742289 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPLQGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREVKLWDTRFFSSALASLTLDTS |
Prediction | 75433302121020312436120120433423230401224020000014341000003023316457314304015321100000044222000013331232040665343253344330410444230300014042000002031434240733412340611532020002034131000004431020202634530153050175232020030352310000013434131024131732530043154558 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSCCCSCCCCCSSSSSCCCCCSSSSSSCCCCCCCCCSSSSSCCCCCCSSSSSSCCCCCCSSSSSSCCCSSSSSSCCCCCSSSSCCCCSSSCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSCCCCSSSSSSCCCCCSSSSSSCCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCSSSSSSCCCCCCCSSSSSCCCC MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPLQGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREVKLWDTRFFSSALASLTLDTS | |||||||||||||||||||
1 | 5wjcA | 0.21 | 0.19 | 6.10 | 1.33 | DEthreader | -----------------DKKIQRISQKIPH-DGDVNRARYMPEIIATMGE-GGNAYIFDTTCHDALTLPQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFKVIS-PIAKYHRHTDIVNDVQFHPQHEALLASVSDCTLQIHDTRLPEAPKVIQAHSKAINAVAINPFDYLLATASADKTVALWDLRNPYQRLHTLEGHE-DEVYGLEWSPHDPILASSSTD----RRVCIWDLEKISELLFMHGGHTN | |||||||||||||
2 | 2aq5A | 0.29 | 0.28 | 8.65 | 1.69 | SPARKS-K | -----SSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALIEASGGAFLVLPLGKTGRVDKNVP-LVGHTAPVLDIAWPH-NDNVIASGSEDCTVMVWEIPDGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGDNVILVWDVGTGAAVLTLGVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLEEPLSLQELDTS | |||||||||||||
3 | 4ozuA | 0.31 | 0.27 | 8.01 | 0.39 | MapAlign | ------------------------------------GLAANTEYIAAPVGGGGVLGILRLADIGRNPA-VAKIKGHTASIQDTNFSPFYRDILATACEDTIVRIWQLPEEVTTELKEPIATLTGALKKVLSAEWNPAVSGILASGCFGTVAFWNVEKNENFASVK-FQESLLSAKWSWKGDLLACTTKDKALNIVDPRAAQ-VVGSVACHDGSKACKCTWIDGDGHVFTTGFGKMQEREMAIWDTRKFDKPVYHAEIDR- | |||||||||||||
4 | 4ozuA | 0.29 | 0.28 | 8.56 | 0.28 | CEthreader | -DAVDVPLIKNLYAEAWKQ--QYSDLRLSTKQTESCGLAANTEYIAAPWDVGGVLGILRLADIGR-NPAVAKIKGHTASIQDTNFSPFYRDILATACEDTIVRIWQLPEEVTGTTELPIATLTGALKKVLSAEWNPAVSGLASGCFDGTVAFWNVEKNENFASVK-FQESLLSAKWSWKGDLLACTTKDKALNIVDPRAA-QVVGSVACHDGSKACKCTWIDRDGHVFTTGFGKMQEREMAIWDTRKFDKPVYHAEIDRG | |||||||||||||
5 | 2aq5A | 0.31 | 0.30 | 8.97 | 1.44 | MUSTER | -----SSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALEASGGGAFLVLPLGKTGRVDKNV-PLVGHTAPVLDIAWPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLRPVITLEGHTKRVGIVAWHPTAQNVLLSAGDNVILVWDVGTGAAVLTLDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGF-SRMSERQVALWDTKHLEEPLSLQELDTS | |||||||||||||
6 | 2aq5A | 0.30 | 0.29 | 8.86 | 0.67 | HHsearch | -----SSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALIEASGGAFLVLPLGKTGRVD-KNVPLVGHTAPVLDIAWPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLEPVITLEGHTKRVGIVAWHPTAQNVLLSAGDNVILVWDVGTGAAVLTLDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLEEPLSLQELDTS | |||||||||||||
7 | 2aq5A | 0.31 | 0.30 | 9.07 | 2.06 | FFAS-3D | -----SSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALEASGGGAFLVLPLGKTGRVDKN-VPLVGHTAPVLDIAWPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLEPVITLEGHTKRVGIVAWHPTAQNVLLSAGDNVILVWDVGTGAAVLTLGVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT-GFSRMSERQVALWDTKHLEEPLSLQELDTS | |||||||||||||
8 | 4ozuA | 0.29 | 0.27 | 8.33 | 0.57 | EigenThreader | VDVPLIKNLYAEAWKQQ-----YSDLRLSTKQTESCGLAANTEYIAAPWGGGGVLGILRLADI--GNPAVAKIKGHTASIQDTNFSPFYRDILATACEDTIVRIWQLPEEVTGTTEEPIATLTGALKKVLSAEWNPAVSGILASGCDGTVAFWNVEKNENFASVKFQ-ESLLSAKWSWKGDLLACTTKDKALNIVDP----RAAQSVACHDGSKACKCTWIDGLAHVFTTGFGKMQEREMAIWTRKFDKPVYHAEIDRGS | |||||||||||||
9 | 2aq5A | 0.30 | 0.30 | 8.97 | 3.06 | CNFpred | -----SSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALIMEAGGAFLVLPLGKTGRVDKNVPLVMGHTAPVLDIAWMPHNDNVIASGSEDCTVMVWEIPDGGLVLPLEPVITLEGHTKRVGIVAWHPTANVLLSAGMDNVILVWDVGTGAAVLTLGVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS | |||||||||||||
10 | 4xyhA | 0.20 | 0.18 | 5.89 | 1.33 | DEthreader | -----------------GSEIQKVVQKIHH-EGDVNKARFMPDIIATLGL-NGNGYIFDLNLYRQIVGHQACLRHHTSEGFGLGWNFIQEGTLATGTEDTSICVWDIKGKSLIDVA-PVSVYHRHTAVVNDLQFHLQHEALLTSVSDCTLQIHDTRLPSASQCVKAHEQPVNGVAFNPFDYLLATASADHTVALWDLRRLNQRLHTLEGHED-EVYNVQWSPHEPILVTSSTD----RRVCVWDLSKIAELMFMHGGHTN | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |