Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCSSSCCCCCCCCCHSHHCCCCCHHHHHHHHHHHHHHCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCSSSSSSSSSCCSSSSSSSSSCCSCCSSSSSSSCC MHRNFRKWIFYVFLCFGVLYVKLGALSSVVALGANIICNKIPGLAPRQRAICQSRPDAIIVIGEGAQMGINECQYQFRFGRWNCSALGEKTVFGQELRVGSREAAFTYAITAAGVAHAVTAACSQGNLSNCGCDREKQGYYNQAEGWKWGGCSADVRYGIDFSRRFVDAREIKKNARRLMNLHNNEAGRKVLEDRMQLECKCHGVSGSCTTKTCWTTLPKFREVGHLLKEKYNAAVQVEVVRASRLRQPTFLRIKQLRSYQKPMETDLVYIEKSPNYCEEDAATGSVGTQGRLCNRTSPGADGCDTMCCGRGYNTHQYTKVWQCNCKFHWCCFVKCNTCSERTEVFTCK |
1 | 6ahyB | 0.37 | 0.29 | 8.59 | 1.00 | DEthreader | | --------------------------------LL---CGSIPGLVP-QLRFCRNYIEIMPSVAEGV-LGIQECQHQFRGRRWNCTTIDDSLAIFGPVLDATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCD-SHH-P-P------WGGCSEDADFGVLVSREFADARENRPDARSAMN-HNNEAGRTTILDHMH-L-CCHGLS-SCEV-TCWWAQPDFRAIGDFL-D-YDSASEMVVEHRESRGWVETLRAYS---LFPPTERDLVYYENSPNFCEPNPE-TGSFGTRDRTCNVTSHGIDGCDLLC-CGRGHNTR-T-ER-----------------IYDVHTC-- |
2 | 4f0aB | 0.39 | 0.32 | 9.41 | 4.96 | SPARKS-K | | -------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGR-IGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL------EMRG------AIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
3 | 4f0aB | 0.39 | 0.32 | 9.49 | 1.63 | MapAlign | | -------------------------------------------TGPKAYL------TYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIGGRGW-VWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGA------------IADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGSQWERCKRLCCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
4 | 4f0aB | 0.39 | 0.32 | 9.49 | 1.57 | CEthreader | | -------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIG-GRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEM------------RGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGWERRSCKRLCTDCGLREKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
5 | 4f0aB | 0.39 | 0.32 | 9.41 | 3.28 | MUSTER | | -------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRI-GGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL------------EMRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLREKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
6 | 4f0aB | 0.39 | 0.32 | 9.41 | 6.38 | HHsearch | | -------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNG-RIGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRG--A----------IADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
7 | 4f0aB | 0.40 | 0.32 | 9.48 | 2.78 | FFAS-3D | | ----------------------------------------------------KAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNG-RIGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLE------------MRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLRSCKRLCTDCGLRVEEKKTESSCNCKFHWCCTVKCEQCKQVVIKHFC- |
8 | 6ahyB | 0.30 | 0.24 | 7.31 | 1.27 | EigenThreader | | --------------------------------LLCGS----IPGLVPQLRFCRNYIEIMPSVAEGV-LGIQECQHQFRGRRWNCTTIDDSLAIFGPVLDATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHGPPGEGWWGGCSEDADFGVLVSREFADARENR-----PDARSAMNHNNEAGRTTI--LDHMHLCCHGLSGSCEVTCWWAQPD-FRAIGDFL-----DYSEMVVE-----HRRGWVETLRAYSLFPPTERDLVYYENSPNFCEPNPETGSFGTRDRTNVTSHGIDGCD---LLCCGRGHNTRTER--ECHCIFHWCYVSCRIYDVHTC----- |
9 | 6ahyB | 0.46 | 0.41 | 11.96 | 3.95 | CNFpred | | -----------------------------------LLCGSIPGLVPMQLRFCRNYIEIMPSVAEGVMLGIQECQHQFRGRRWNCTTIDDLAIFGPVLDMATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHMG--PPGEGWMWGGCSEDADFGVLVSREFADARENRPDARSAMNMHNNEAGRTTILDHMHLMCMCHGLSGSCEVMTCWWAQPDFRAIGDFLMDMYDSASEMVVEMHRESRGWVETLRAMYSLFMPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEMRMEMCHCIFHWCCYVSCQECIRIYDVHTCM |
10 | 4f0aB | 0.34 | 0.25 | 7.47 | 1.00 | DEthreader | | ----------------------------------------------T--GP-KAYLTYSASVAVGAQNGIEECKYQFAW-ERWNCPE-STLQLHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCD-DSRNGRI------WGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLE-M-RGAI--ADAFS--------SVAGSELIFLEDSPDYCLKNIS-LGLQGTEGRECLQSSQWESCKRLCTDCGLRVEEK-KTE------------------V-IKHFCA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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