Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MMATQTLSIDSYQDGQQMQVVTELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYRHPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAITGTISPQGIVVPASALQQGNVAMATVAGGTVYQPVTVVTPQGQVVTQTLSPGTIRIQNSQLQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSIASGVAQPPPSELTMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSTEEDAGALAPAHISGLVLENSDSLQ |
1 | 5yfpD | 0.07 | 0.07 | 2.88 | 1.14 | SPARKS-K | | EIHDIMYSKSNKTNF---TRVTNNDIFKIISISHNGFTSLENYLYNIVNIDIMEHSKTINKNLEQFIHDQRIGFLLKTINNLPVAFNIITERAKEEIHNIIVKSNDNHFGLPVFWEIFLKLLYAIQCHRAIFEMKPAFKFNKIGKLLDEIELLLVRYINDPELISSNNINGEDNSSVKDQAFELKAKDIFNMKVILDPFLLFTQSTSTIVPSVLTQNTISSLTFFDDYMNKSFLPKIQMTMDYLFTVEVESNNPYALELSDENHNIFKTALDFQRLFYNLLNTANTFREKISYCILDLLNHFYNYYLGLF----------------NSLIGTSDRHLTRKIITAWLQNILMDQEQKILNGDETLFHEESIELFKEIPHFYQAGKGLSKSDASVLWILNWLPGKAINIDEVSQEPMLDADRLTFSESMDLNYSNPSS |
2 | 2pffB | 0.08 | 0.08 | 3.12 | 1.89 | MapAlign | | --------MDAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKFDQVLNLCLKNYITARIMAKRPFYLLSIPISCPLIGVIQLAHYVVRKAITVLFFIVQDYVNKTNSHLPAGKQVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLYKTSKAAQDVWNRADNHTQPALTLMEKAAFEDLKSKGLIIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQ-------------QYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEGGGGGGGGG |
3 | 2lk2A | 0.34 | 0.07 | 2.06 | 2.64 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHHHHHSHMLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISE--------------------------------------------------------------------------------------------- |
4 | 4f1nA | 0.09 | 0.09 | 3.54 | 0.98 | CEthreader | | DAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKPTFETSPGEISLLNLLENIPSNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNM |
5 | 6gmhQ | 0.06 | 0.06 | 2.55 | 0.82 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGSAYGTATRILQEKVQADVPNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQ |
6 | 1x2nA | 0.87 | 0.14 | 4.00 | 0.96 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSGKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQSGPSS---------------------------------------------------------------------------------------------------------------- |
7 | 5jcss | 0.10 | 0.09 | 3.19 | 1.10 | SPARKS-K | | QKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDS-----------------YKNVKSIYMNTKFISLNKGARDLIKLCERLDILFKNNNKPDQLIQS-------------SVYDSIFSEAADCFEPIIQAIGESLDIA---SSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEVLLVGETGTGKTTVVQQLAKMLAKKETGDLLGGYKPKTVA--------------------VPIQENFETLFNATFSLKKNEKF---------------HKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWA---DFNDSVKKFEAQSSSIENSFVFNVEGSLVKTIRAGLLLDEVNLAT |
8 | 7jh5A | 0.15 | 0.05 | 1.78 | 0.64 | CNFpred | | --------------------------------------------------LEEAREAISGSELAKLLLKAIAETQDL-------NLRAAKAFLEAAA---------------KLQELNIRAVELLV-IREALEHAKRRSKEIIDEAERAIRAARESERIIEE-------------------------------------------------ARRLIEK---GSELARELLRAH-------------------------------QLQRLNLELLRELLRALA----QLQELNLDLLRLAELTDPDEARKAIARVKRE----------------------------------------------------------------------------------------------------------------------- |
9 | 6g2dC | 0.05 | 0.04 | 1.78 | 0.67 | DEthreader | | -------------------------------------------S-DGSSYTT---ALRGRVFHYVLDNLVNVMNGYCLPD---SS-VKDWVERLMKTLRDPSLPLELDISVMN-SQ-----VMDLLRQYLRVETQVLSKTTNAK-------------A---VGTEVTDYRFF-MELEVAFNNTDCNHIFLN---IMDPSKIEVRV--L-----AELKIN--AIPIRL-------YYLDISLYADKQGPLH-------T-TEMNRLPGGNEIGMDITYRIGSNSGARIGLAEEIRHMFVSVITDIIG-GIGPENLGSAIGIGAYLVRLGQRTVWLYSEIMQQTVAVETRTV-AGQVWSATAIKFNREGL-LMVFANWRGFSGG-----Q---R--EPEGTVEIKFRRKDLV------EFIPIYHQVQFADLHDTP-M |
10 | 1vt4I3 | 0.06 | 0.05 | 2.25 | 1.87 | MapAlign | | -------------------------------------------LHRSIVDHYNIPKTFSDDLIPDQYFYSHIGHHLK-----NIEHPERMTLFDFRFLEQKIRNASGSILNTLQQLKFYKPYICDNPKYERLVNAILDAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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