>P55209 (391 residues) MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHCCHHHHHHHHHCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 9988887765567666655433345667765212578888774298999999998875323443235537999999999999999999999999999999999999999713777688874166678524421331134554456666654311111110221148752899999808345541886789999843717999832899773799999668878657569999998326888888655777420454011477788553212333320355677642112347899865558999999754314579998853079999999720551889863776555666656654433333322334445533466788997424589 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ |
Prediction | 6653556535645561663553656554555536355245523733512530453155135444520561265045105103501551440454045213502440352144125423523543341554436345534533455355443444543465554254023000100200420352046403500410340303225576331020203036362044320101021334435634131544414414214041354351145345454456546444425563646000000235625655534532452153013003202540002003001240354655444465465566646664666666665666653551568 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHCCHHHHHHHHHCCCSSSSSSCCCCCCCSSSSSSSCCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ | |||||||||||||||||||
1 | 6n2gA | 0.44 | 0.29 | 8.53 | 1.00 | DEthreader | -----------------------------------------------------------------Q--PLN--VKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPE-LEGDQLA-EL----YK-AA--EADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAAS-KDPA-GFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKK-----------FLTKTVKADSFFNFFEPPKSKD-DEDDEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSDDM---------------------------------------- | |||||||||||||
2 | 6n2gA | 0.45 | 0.32 | 9.50 | 3.56 | SPARKS-K | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLE------GDQLAELYKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQKKGANAGKF-LTKTVKADSFFNFFEPPKSKDDED-DEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGEL-QSDDMF-------------------------------------- | |||||||||||||
3 | 6n2gA | 0.45 | 0.33 | 9.64 | 1.89 | MapAlign | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQI------DTPILEGLEGDQLAELYKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQK-KGANAGKFLTKTVKADSFFNFFEPPKSKDDEDD-EQAEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSDDMF--------------------------------------- | |||||||||||||
4 | 6n2gA | 0.44 | 0.32 | 9.43 | 1.56 | CEthreader | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEG------LEGDQLAELYKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAAS--KDPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQKKGANAGK-FLTKTVKADSFFNFFEPPKSKDD-EDDEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSDDMF--------------------------------------- | |||||||||||||
5 | 6n2gA | 0.44 | 0.32 | 9.36 | 2.67 | MUSTER | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLAELYKA------AEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQKKGANAG-KFLTKTVKADSFFNFFEPPKSKDDED-DEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGEL-QSDDMF-------------------------------------- | |||||||||||||
6 | 6n2gA | 0.44 | 0.32 | 9.43 | 5.10 | HHsearch | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLA-E-----LYKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQKKGANAGKF-LTKTVKADSFFNFFEPPKSKDDE-DDEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGEL-QSDDMF-------------------------------------- | |||||||||||||
7 | 6n2gA | 0.44 | 0.32 | 9.36 | 3.00 | FFAS-3D | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLAEL------YKAAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVT-KKAVKKKQKKGANAGKFLTKTVKADSFFNFFEPPKSKDDED-DEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSDDMF--------------------------------------- | |||||||||||||
8 | 6n2gA | 0.40 | 0.29 | 8.60 | 1.67 | EigenThreader | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLAELYK------AAEADPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQKKGANAGKFLTKTVKADSFFNFFEPPKSKDDEDDEQ--AEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSDDMF--------------------------------------- | |||||||||||||
9 | 6n2gA | 0.44 | 0.32 | 9.29 | 2.29 | CNFpred | ---------------------------------------------------------GLLSTNFDMIQALPLNVKQRVCALKNLQMKTIQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLAELYKAAEAD------PSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASK--DPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNVTKKAVKKKQKKGAN-AGKFLTKTVKADSFFNFFEPPKSKD-DEDDEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSDDMF--------------------------------------- | |||||||||||||
10 | 2ayuA | 0.34 | 0.22 | 6.59 | 0.83 | DEthreader | --------------------------------------------------------------S--VG-GLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKQEIVES-NET--L----VD--E---EQ--VKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLEYLTDGRP-GFKLLFRFDANPFFTNDILCKTYFYQKEL----GYSGDFIYDHAEGCEISWKDNAHNVTVDLEMR----------Q--EKITPIESFFNFFDPPKIQNEDDLEEDLEERLALDYSIGEQLKDKLIPRAVDWFTGAALEFEFE--------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |