Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCHHHHHHCCCCHHHHHHHHCCSSSCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCSSSSSSCCCSSSCCCCCCCCHHHHHHHHHHHHHHHHCCCSSSSSCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSCCHHHCCCHHHHHHHHHHHHHHHHCCCCCSSCCCCCCCCCCCCCCCCCCCCSSSSCCCCHHHHHHHHHC MLSQVYRCGFQPFNQHLLPWVKCTTVFRSHCIQPSVIRHVRSWSNIPFITVPLSRTHGKSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGAVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQYSICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNVISVKDNDSLAARLAVEM |
1 | 4q1tA | 0.42 | 0.26 | 7.55 | 0.83 | DEthreader | | -------------------------------------------------------------MR-SIIADSKRLVVKVGSSLVTN---G-LDHDAIGRWAAQIAALRNEGKEVVLVSSGAIAEGMQR----LG--WSRRPR---------EIDE-L--QA-AAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTD-------------EIKDNDTLGALVANLI |
2 | 2j5tD1 | 0.36 | 0.22 | 6.60 | 1.40 | SPARKS-K | | --------------------------------------------------------------------DSQTLVVKLGTSVLTGGSR-RLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYP-------------------ELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIKVG-----------DNDNLSALAAILA |
3 | 2j5tD1 | 0.38 | 0.23 | 6.81 | 0.92 | MapAlign | | ---------------------------------------------------------------------SQTLVVKLGTSVLTGG-SRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL-------------------GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVA-----------TAEIKVGDNDNLSALAAILA |
4 | 2j5tD1 | 0.37 | 0.23 | 6.81 | 0.67 | CEthreader | | --------------------------------------------------------------------DSQTLVVKLGTSVLTGGS-RRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYP-------------------ELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATA-----------EIKVGDNDNLSALAAILA |
5 | 2j5tD1 | 0.37 | 0.23 | 6.71 | 1.26 | MUSTER | | --------------------------------------------------------------------DSQTLVVKLGTSVLTGGSR-RLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLG-------------------YPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIK-----------VGDNDNLSALAAILA |
6 | 2j5tD | 0.37 | 0.23 | 6.71 | 2.82 | HHsearch | | --------------------------------------------------------------------DSQTLVVKLGTSVLTGGS-RRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPE-------------------LPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATA-----------EIKVGDNDNLSALAAILA |
7 | 2j5tD1 | 0.36 | 0.22 | 6.60 | 1.72 | FFAS-3D | | --------------------------------------------------------------------DSQTLVVKLGTSVLTG-GSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLG-------------------YPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIK-----------VGDNDNLSALAAILA |
8 | 2j5tD1 | 0.37 | 0.22 | 6.59 | 0.78 | EigenThreader | | --------------------------------------------------------------------DSQTLVVKLGTSVLTGG-SRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYP---------------------ELPAASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAE-------------IKVNDNLSALAAILA |
9 | 2j5tA | 0.37 | 0.23 | 6.81 | 1.37 | CNFpred | | --------------------------------------------------------------------DSQTLVVKLGTSVLTGG-SRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELP-------------------ATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATA-----------EIKVGDNDNLSALAAILA |
10 | 4q1tA1 | 0.41 | 0.25 | 7.44 | 0.83 | DEthreader | | -------------------------------------------------------------MRS-IIADSKRLVVKVGSSLVTN---G-LDHDAIGRWAAQIAALRNEGKEVVLVSSGAIAEGMQR----LG--WSRRPR---------E-DE-L--QA-AAAVGQMGLAQVYESRFAEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTD-------------EIKDNDTLGALVANLI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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