Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHSSSSHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHCCCCCCCC MTSSYGHVLERQPALGGRLDSPGNLDTLQAKKNFSVSHLLDLEEAGDMVAAQADENVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYSAMATYSATCANNSPAQGINMANSIANLRLKAKEYSLQRNQVPTVN |
1 | 1pufA | 0.31 | 0.09 | 2.84 | 1.15 | FFAS-3D | | ---------------------------------------------------------------------------------NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR----------------------------------------------------------------------------------------- |
2 | 1pufA | 0.31 | 0.10 | 2.96 | 1.19 | SPARKS-K | | ----------------------------------------------------------------------------NNPAANWLHA-----RSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDRAK--------------------------------------------------------------------------------------- |
3 | 3amtA | 0.03 | 0.03 | 1.83 | 1.29 | MapAlign | | ------------VGIDDTDSSRGCTYLAVLAERVERELGKVIGFPRLIRLNPTIPYKTRGNGAVSFLVEVDDVGELVDVVNEVIIEHALDDEKTNPGAVFVDEELAVKLKPFADKAIKLQIDEALFVIGKYFIPHLLIGALAAVGAGIRGESVEALYKAESVKTEPVDRRIFVTNHATDHLIGEEEVHRLENYRSYRLRGRVTLEPYDIEGGHVFFEIDTKAFEPTKQFRNVIYGSKKDTINLEK |
4 | 2cufA | 0.28 | 0.09 | 2.75 | 1.45 | HHsearch | | ---------------------------------------------------------------------------------------GSSGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACRVTSLKVYNWFANRRKEIKRRANIAAI------LESSGPSSG------------------------------------------------------------------------ |
5 | 5flvI | 0.19 | 0.11 | 3.69 | 0.51 | CEthreader | | ------------------------------------------------------------------------------------------------PRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKSKRQRVFLHERELWLKFHEVGTEMIITKAPSYKVVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLV |
6 | 6wmrZ | 0.03 | 0.03 | 1.82 | 0.67 | EigenThreader | | SEN---EPVARYIRFNETRLSTSHLQKLVDYIRLPYARVKEFERKILRLCVERSKTPRLEPLTKKYKFTENTIREIKNLTKQINQFQILMMMDIEELTQAKKEMIERLVVSEA---KKYTNQEGNIGLMKAVDKFWWIRQAITRSIADQATINKVNRIKRQILQEKGREATEEEIIEHTPNMSKEKLKKILNISHTPISMESPIG----------DDEDSTVGDFIEAKVLMMRFGIGMNTDHTL |
7 | 2cufA | 0.32 | 0.09 | 2.58 | 1.14 | FFAS-3D | | -----------------------------------------------------------------------------------------SGSSGRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNVTSLKVYNWFANRRKEIKRRAN------------------------------------------------------------------------------------------- |
8 | 1fjlA | 0.65 | 0.17 | 4.89 | 1.19 | SPARKS-K | | --------------------------------------------------------------------------------------------KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTSVS---------------------------------------------------------------------------------------- |
9 | 1fjlA | 0.65 | 0.17 | 4.89 | 0.87 | CNFpred | | --------------------------------------------------------------------------------------------KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQHTSVS---------------------------------------------------------------------------------------- |
10 | 7jsnA | 0.05 | 0.03 | 1.39 | 0.67 | DEthreader | | ------------------------------------------------------------------------LDSNVSFAK-YY------NSVEESFLLQADRMSLNGVVGHVALSKKI---VNVPILKGPHFTENDEEILLKYLNFANLIMKVHLSYLHNCETRRGQILWSGKVFELTD-----------KYVKCDNIQTILTREGKEWECEEEEELVRFMYSLSGWGFCHDIDHLETDLAMMM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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