>P54819 (163 residues) MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE KLDSVIEFSIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI |
Prediction | CCCCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHCCCSSCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHCCCCCSSSSSSCCHHHCCCCCHHHHHHHHHCCSSCCCCCCSSSSC |
Confidence | 9999988776667761899988999976899999999969984554799999998399889999999981999997999999999992723347957539999899999999999991998778999977813302443479999987483418999868839 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI |
Prediction | 8637455666645420100001123021221053017527030000131025106762510530451075371021400040035106555264000000121236005302510673725010001030346245644342004102422315715420114 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHCCCSSCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHCCCCCSSSSSSCCHHHCCCCCHHHHHHHHHCCSSCCCCCCSSSSC MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI | |||||||||||||||||||
1 | 3tlxA1 | 0.36 | 0.33 | 9.69 | 1.33 | DEthreader | IDNELKRRY-CLS-PDGRYIFLGAGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDLNKLLQKNQ--TKLDGVFYFNINLDATQPANDLEKKISQHIDG---------- | |||||||||||||
2 | 2c9yA1 | 1.00 | 0.87 | 24.39 | 1.32 | SPARKS-K | --------------GIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIHSAIDASQTPDVVFASILAAFSKATC------- | |||||||||||||
3 | 3dl0A | 0.38 | 0.33 | 9.64 | 0.89 | MapAlign | ---------------MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVLVNVNGQQDIQDVYADLKVLLGGLK-------- | |||||||||||||
4 | 1qf9A | 0.28 | 0.25 | 7.52 | 0.74 | CEthreader | ---------MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDA-NQGKNFLVDGFPRNEENNNSWEENMKDFV-DTKFVLFFDCVKIIPANRDVNEVYNDVENLFKSMGF------- | |||||||||||||
5 | 2c9yA1 | 1.00 | 0.87 | 24.39 | 1.34 | MUSTER | --------------GIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIHSAIDASQTPDVVFASILAAFSKATC------- | |||||||||||||
6 | 2c9yA1 | 0.99 | 0.87 | 24.23 | 1.00 | HHsearch | --------------GIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSNHSAIDASQTPDVVFASILAAFSKATC------- | |||||||||||||
7 | 2rgxA | 0.41 | 0.36 | 10.66 | 2.08 | FFAS-3D | ---------------MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPK---HGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIQREDDEVIKKRLEVYREQTAPLIEYY- | |||||||||||||
8 | 3tlxA | 0.38 | 0.36 | 10.54 | 0.62 | EigenThreader | LNELKRRYACLSKPDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVINLDATQP-ANDLEKKISQHIDG---------- | |||||||||||||
9 | 2c9yA | 0.90 | 0.72 | 20.18 | 1.18 | CNFpred | --------------GIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIP--------DSLLIRRITGRLI----------- | |||||||||||||
10 | 3tlxA | 0.36 | 0.33 | 9.69 | 1.33 | DEthreader | IDNELKRRY-CLS-PDGRYIFLGAGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDGYPRNVKQAEDLNKLLQKNQ--TKLDGVFYFNINLDATQPANDLEKKISQHIDG---------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |