>P54278 (366 residues) MERAESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKD YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV TISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKE YAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLI PFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPA KVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI GMFDSD |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MERAESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSD |
Prediction | CCCCCCCCCCCCCCCSSCCHHHHHHHCCCCSSCCHHHHHHHHHHHHHCCCCCSSSSSSSCCCSSSSSSSSCCCCCCHHHHHHHHHCHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCSSSSSSSCCCCCCSSSSSSSCCCCSSSSSSCCCCCCSSSSSSSCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCSSSSSSSCCCCCCSSSSSSCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCSSSSSCCCSSCCHHHHHHHHHHHHHCCCCCCSSSSSSSSCCCCCSSSCSCCCCCSSSSCCHHHHHHHHHHHHHHHHHCC |
Confidence | 998888888899876329999999862567223577999999984141599879999964883599999799988999999998620576889856752153447524999999975537999705998765999994798270025437999859999414346718999861694999999999999997318991899998277772356897489999999999985999998422123158765302321566544457982799998388654567778837999859232787999999999997148997199999982813221100888875553678999999999999998249 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MERAESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSD |
Prediction | 565465664643530440376003201000002200200100000011050540303047202510102030320345104200420000104527304404220010000300030040102022672520020202553533545516335101010322024020113213442450043025003200001050101021335634432202134332124000201255005301403434454433453425344454431201000030334243434410000001010425302400330064036420000000010326201000011255133631520150025004610768 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCSSCCHHHHHHHCCCCSSCCHHHHHHHHHHHHHCCCCCSSSSSSSCCCSSSSSSSSCCCCCCHHHHHHHHHCHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCSSSSSSSCCCCCCSSSSSSSCCCCSSSSSSCCCCCCSSSSSSSCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCSSSSSSSCCCCCCSSSSSSCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCSSSSSCCCSSCCHHHHHHHHHHHHHCCCCCCSSSSSSSSCCCCCSSSCSCCCCCSSSSCCHHHHHHHHHHHHHHHHHCC MERAESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSD | |||||||||||||||||||
1 | 1nhjA | 0.25 | 0.22 | 6.69 | 1.33 | DEthreader | -------------------VL-PQ-ANIAEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALPSISSVSRLTLTSRTAEQQEAWQAYAEGDMNVT-VKPAAHPVGTTLEVLDLFYNTPARRKFL-RTEKTEFNHIDEIIRRIALARFDVTINLSHN-----GKIVRQYRAVPQKERRLGAICGTAFLEQALAIEWQH------------------GDLTLRGWVADPN-HTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGAQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQ-- | |||||||||||||
2 | 3h4lB | 0.41 | 0.39 | 11.33 | 3.33 | SPARKS-K | ----------------QINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTT-SPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDL----NPFKNRMLLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLID----PDKRVILLHNERAVIDIFKTTLSDYYNRQ | |||||||||||||
3 | 1nhjA | 0.26 | 0.22 | 6.92 | 1.39 | MapAlign | -----------------LPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALPSISSVSRLTLTSRTAEQQEAWQAYAERDMNVT-VKPAAHPVGTTLEVLDLFYNTPARRKFL-RTEKTEFNHIDEIIRRIALARFDVTINLSHNG-----KIVRQYRAVPQKERRLGAICGTAFLEQALAIEWQH------------------GDLTLRGWVADP--NHTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQ-- | |||||||||||||
4 | 3h4lB | 0.41 | 0.39 | 11.33 | 1.07 | CEthreader | ----------------QINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTT-SPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFKNRMLLDL----DYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLID----PDKRVILLHNERAVIDIFKTTLSDYYNRQ | |||||||||||||
5 | 3h4lB | 0.41 | 0.38 | 11.26 | 2.53 | MUSTER | ----------------QINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTT-SPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPF----KNRMLLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLID-----DKRVILLHNERAVIDIFKTTLSDYYNRQ | |||||||||||||
6 | 1nhjA | 0.26 | 0.23 | 7.24 | 3.47 | HHsearch | ----------SHMPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALPSISSVSRLTLTSRTAEQQEAWQAYAE-GRDNVTVKPAAHPVGTTLEVLDLFYNTPARRK-FLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGK-----IVRQYRAVPQKERRLGAICGTAFLEQALAIEW------------------QHGDLTLRGWVADPNH-TTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQ-- | |||||||||||||
7 | 3h4lB | 0.41 | 0.38 | 11.26 | 3.26 | FFAS-3D | ----------------QINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKADKLE-YDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLV----LDLNPFKNRMLLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLID----PDKRVILLHNERAVIDIFKTTLSDYYNR- | |||||||||||||
8 | 1nhjA | 0.24 | 0.22 | 6.80 | 1.75 | EigenThreader | -----SHMPIQVL-----PPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALPSISSVSRLTLTSRTAEQQEAWQAYAERDMNVTVKPAA-HPVGTTLEVLDLFYNT-PARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNG-----KIVRQYRAVGQKERRLGAICGTAFLEQALAIEW------QHG------------DLTLRGWVADPN-HTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQ-- | |||||||||||||
9 | 1h7sA | 1.00 | 0.88 | 24.56 | 3.83 | CNFpred | ----------------------------GQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTL----------ADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDIN------QILLQEEKLLLAVLKTSLIGMFDS- | |||||||||||||
10 | 3h4lB | 0.41 | 0.35 | 10.22 | 1.33 | DEthreader | -----------------------H--TSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHY-----------------FRGEALSSLCGIAKLSVITTT-SPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLN--P----FKNRMDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLID---PD-KRVILLHNERAVIDIFKTTLSDYYNRL | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |