Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCHHHSSSCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TNSYENNKTDVSAADIVLSKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGENEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNNYPIPEQMNLNEDSCNKKSNVI |
1 | 3iaiA | 0.06 | 0.06 | 2.62 | 0.52 | CEthreader | | DQSHWRYGGDPPWPRVSPACAGRFQSPVDIRPQLAAFSPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPPGLEMALGPG----------REYRALQLHLHWGAAGRPGSEHTVEIHVVHLSTAFARVDEALGRPGGLAVLAAALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMHTLSDTLWGPGDSRLQLNFRATQPLNGRVIE |
2 | 1ut9A | 0.05 | 0.05 | 2.27 | 0.52 | EigenThreader | | DILDEARWEIEFFKKMQVTEAATLNFAATLAQSARLWKDYGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGANGEDNGLWGCFTWGTTQGLGTITLALVENGQGYRLPIILNQMIVMGYAYDFTGDSKYLDGMFDGISYLLGRNVTGYGERPLQNPHDRFWTPAPPPGIISGGPNSRFCFIDHTDSWSTNEI---TVNWNAPFA |
3 | 1nwxT | 0.11 | 0.09 | 3.06 | 0.32 | FFAS-3D | | -------TVEGGETFPALVKAVQMDKRKRAVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLP----EGCTLAADPELTVVSVLPPRLTAEELEAEVQAAQVAGLVAAGELSEEAAEAVLEGDSLEEVKAEASE---------------------------------------- |
4 | 5jcss | 0.07 | 0.07 | 2.73 | 1.01 | SPARKS-K | | GINKPDQLIQSSVYDGAIGEFKALEPIIQAIGESLDIASSRISLFLTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRVCIQMTEPVLMLAKKLTVINVSQQTETGYKPKTVAVPNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQS-------------ILKITNTENENENAKKKKRRLNTHEKKLLLDKW |
5 | 4a01A | 0.06 | 0.05 | 2.06 | 0.67 | DEthreader | | -----------------SEGAT-F-E--VFMAFLIFLASTSF-GGSLSGLGIVMGFLLMGSDLFGSYESSCALVASFMYALPTSKSQLFLVAVLGSTI-----------------TSVA-KMEEVRRNTILMAKPDYATCVKISTASEIPPAVMLTPLVVGGVE--S--L-GSLG-AASGGWDKKIEAGRGPKCHKAAVIGDIGLKSGSLI |
6 | 6g18u | 0.06 | 0.06 | 2.53 | 0.84 | MapAlign | | LRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDGTVHLNELGNTQNFMLLFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLFSLLPHEQKMSVLNMVVRRFSQHTAADKHKLQRFLTADMALVATVYAPITFP-PASVLLFKQKSNGMHSLLMSVRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLM |
7 | 5n5xA2 | 0.11 | 0.10 | 3.75 | 0.71 | MUSTER | | IIVDHPEWASL-FNNADEREKESIGALVSQIKLKERERISRVQNLIEHENSHDEDKYGYRLSIATNELLESWQKTKDESILSGSLSHSKLKN-LLENSDSFASIPEFSSQFFQYYQDQDVTFIGFEKLLHLFLHEDVPG--DIFYNKLLQC----W--VLVSPQAELLTKEIVKDII---WSLARLEKPSLFEPIQNEISRSLSGPYQDII |
8 | 2pffB | 0.15 | 0.14 | 4.77 | 0.74 | HHsearch | | AKRPFDKKSNSALFRAVGEGNAQLVAIFSFFVSCYEAYPNLSISNLTQEQ-VQ---------DYVNSHLPAGKQVEISLVN--GAKNLNLTLRKAKAPSGLD---QSRIPFSEKFSNRFLSPFHSHLPASDLINDLVKNNVSFNAKDIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHLDFGPGGASGLHRNKGVRVI |
9 | 1z45A | 0.06 | 0.06 | 2.53 | 0.48 | CEthreader | | VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQLRGVEARFSAEDMRYDARFVTIGAGTRFQATFANLGASIVDLKVNGQSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFS-LCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPSKDVFTAEYMLIDNEKDTTIQYTVNVAQKSLEIVYKGKLTAGEATPI |
10 | 1eg7A | 0.06 | 0.06 | 2.63 | 0.50 | EigenThreader | | DIEIAQAAKPDGLVTAITPTPAGEGTSVGLTDALARLGKRVMVCLREPSLGPSFGIKGGAAGGGYLCLASDLMDLKERFSRKAGDLEAQGSMALLMKDAIKPNLVQTLENTDAVIVATVRALKMHGGVPKSDLATENLEALREGFANLEKHIENIGKFGVALSWAKGGEGGLE----LSNFHVLYNLDLSIKDKIAKIATEIYGAD----G |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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