Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC MRPKRLGRCCAGSRLGPGDPAALTCAPSPSASPAPEPSAQPQARGTGQRVGSRATSGSQFLSEARTGARPASEAGAKAGARRPSAFSAIQGDVRSMPDNSDAPWTRFVFQGPFGSRATGRGTGKAAGIWKTPAAYVGRRPGVSGPERAAFIRELEEALCPNLPPPVKKITQEDVKVMLYLLEELLPPVWESVTYGMVLQRERDLNTAARIGQSLVKQNSVLMEENSKLEALLGSAKEEILYLRHQVNLRDELLQLYSDSDEEDEDEEEEEEEKEAEEEQEEEEAEEDLQCAHPCDAPKLISQEALLHQHHCPQLEALQEKLRLLEEENHQLREEASQLDTLEDEEQMLILECVEQFSEASQQMAELSEVLVLRLENYERQQQEVARLQAQVLKLQQRCRMYGAETEKLQKQLASEKEIQMQLQEESVWVGSQLQDLREKYMDCGGMLIEMQEEVKTLRQQPPVSTGSATHYPYSVPLETLPGFQETLAEELRTSLRRMISDPVYFMERNYEMPRGDTSSLRYDFRYSEDREQVRGFEAEEGLMLAADIMRGEDFTPAEEFVPQEELGAAKKVPAEEGVMEEAELVSEETEGWEEVELELDEATRMNVVTSALEASGLGPSHLDMNYVLQQLANWQDAHYRRQLRWKMLQKGECPHGALPAASRTSCRSSCR |
1 | 4xriA | 0.08 | 0.08 | 3.05 | 1.33 | EigenThreader | | YLLTLVQALANESSEGHIRAAAGIALKNAFSARENQTDQETRTRVKQLALETLASPNSKAGQAAAQVIAAIAAIELPRNQWPELMHALVRNASEGGQHQKQASLTAIGFICETQDTDLRNSLVGHSNAILTAVVQGARKEEPNNEVRFAAITALGDSLEFVGNNF---KHEGERNYIMQVVCEATQ-------AQDSRIQQGAFGCLNRIMALYYEHMRYYMEKALFGLTILGMKAVEFWSTVCEEEIAIEDDNAQVQMRPFYNFARVATNEVVPVLLQLLT-------KQDEDASDDEYNISRAAYQCLQLYAQAVGSTIIPPVIQFVEHNL---RHADWHFRDAAVSAFGAILTVTTVRTAAYEVLSVFVQNAANDSLSAVASLSTVILQRLEETLPLQQILEDMQTSLCTVLQATVQRLDKEIAPQGDRIMQVLLQILSTCGGGVFAAISALANAMEEEFAKYMEAFAPFLYNALGNQEEVTRSLGERSQPYCDNFMNYLLGNLRSTTLANQFKPAILQCFGDIASAIGGHFETYLTIVAQVLQQAATITAGPD---GSYEMIDYVISLREGIMDAWGGIIGAMKTSNK---TNVLQPYVESIFALLNSIANDPNRSEALMRASMGVIGDLADAYWITAMIRETRSNREFGARTIETARWAREQVKRQ |
2 | 5a9qA | 0.10 | 0.10 | 3.58 | 1.22 | FFAS-3D | | --------STCPFRARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGDTFPFQKPMMETQMTAGVDGHSWALSAIDTPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSLFKLHQEDQACAT----CLILACSTCDREVSAWATRAFFRYGGEAQMRFTTLPVYSGKHNGICIYFSRIMGNIWDASLVVESSVPCQLLESVLQELQEFLDRNSQFAGGEAQIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDI-CDRSRQVRESLKEYQKISNDLSNVCAQYRQVRFYEGVLSLTAAEKKDPQGLGLHFYKHGEPEGLQAFQERLNSYKCITDTLQELVEAGHHFEQMLKALYNWLIQVDLADKLLQVASPFLEPHLVDLLWRYYEKNRSFSNAARVLSRLADMHTEIS-LQQRLEYIARAILSAEFLHELEEKMEVAIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYDFIVQFLEQQVDVGFVIQTMNEIGVPLPRL--LEVYDQLFKLHLLDCIHVLLIRYVENPS----QVLNCERRRFTNLC- |
3 | 6f1te | 0.09 | 0.08 | 3.24 | 1.17 | SPARKS-K | | FLSDPQVHTVLVERSTLKEFISYNINIDIHYGVKRTPVIDADKPVSSQLRVLTLSEDSPFISNAVAPFFKSYIRESDKMAPSVEKIAELEMGLLHLQQNIEIPEISL----PIHPMITRGEKPKVTDFWREIQKVTKLDRDPASGNLERALYRIQEKRE-----------SPEVLLTLDILKHGKRFHA---------TVSFDTDTGLKQALETVNDYNPLMKDFPLNDLLSATELDKIRQALVAIFTHLRKIRNTKYP------IQRALRLVEAISRDLSSQLLKVLGTRKLMHVA--YEEFEKVMVACFEVFQTWDDEYEKLQVLLRDIVKRKREENLKMNPAHRKLQARLDQMRKFRRQHEQLRAVIVRAIEEVNLAYENVKEGTEAWEAAMKRYDERIDRVETRITARLRDNEMFRIFSRFNALFVHIRGAIREYQTQLIQRVKDDIESLHDKFKVQYPQSQACKMSVRDLP-------PVSGSIIWAKQIDRQLTAYMKRVEDVLGKGWENHVEGQKLKQDGDSFRMKLTQEIFDDWARKVQQRNLGVSGRIFTIESTRVRGRNVLKLKWLGFRLAIVNKAHQANQLYPFAISLIESVRTYERTCEKVEERVAGLKKEVQALIAEGIAWAETVFNFQEKVDDLLIIEEKIDLEVRSLETCMYDHKT |
4 | 5bv9A | 0.07 | 0.05 | 2.24 | 1.89 | MapAlign | | FSPEGIPYHSIETLICEAPDYGHMTEKPYPDQYPSQLSGARPAGQDPIDGELKSTYGTNETYLMHWLLDVDNWYKYGNLLNPSHKAAYVNTFQRGQQESVWEAIPHPSQDDKSFGKPNEGFMSLFTKENQVPAAQWRYTNATD-ADARAIQAIYWAKELGYNNSTYLDKAKKMGDFLRYGMYDKYFQTIGSGKQGNPYPGACHYLMAWYTSWGGGWRIGASHCHQGYQNPVAAYALSSDKGGLKPSSATGASDWEK--------TLKRQLEFYVWLIAGGATNSWGDYSAYPAGRSTFYDMAYEDAPVYHDPPSNNWFGMQAWPMERVAELYYIFVKDGDKTSENVQMAKSCITKWVNYALQSATGNPNLTAVTKDPTQDTGVLGSLVKAFTFFAAATKLETNYTALGVRAKDAAAQLLEVAWVTEEEREDYDRFFKKEVYFPNGWNGTFGQGNQIPGSSTIPSDPQRGGNGVYTSFADLRPNIKQDPAWSSLESKYQS--------------------------------------------------------------------------------------------------------------SFNEATGKWENGAPVFTYHRFWSQVDMATAYAEYHRLIN----------------------- |
5 | 6f1tX1 | 0.21 | 0.04 | 1.38 | 1.84 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIRQ----------------KEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENRE------------------------------------------------------------GEWEGRVSELETDVKQLQDELERQQL-----------------------------------HLREADREKTRAV----------QELSEQNQRLLDQLSRASEVERQLSMQ-------VHALKEDFREKNSSTN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6xteA | 0.06 | 0.06 | 2.63 | 1.32 | EigenThreader | | FLQAVNDSCYQNDDSVLKSLVEIADTVPKYLRPHLEATLQLSLKLCGDTSLNNMQRQLALEVIVTLSETAAAMLRKHTNIVAQTIPQMLAMMVDLEDFDSNAVAGESALDRMACGLGDWKYRHAGLMALSAIGEGCHQQMEGILNEIVNFVLLFLQDCNAVGQMATDFAPGFQKKFHEKVIAALLQTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQK----GTKLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVENA-----VQKELRLLRGKTIECISLIGLAVGKEKFMQDASDVMQLLLKTQTDFPQISYMISAWARMCKILGKEFQQYLPVVMGPLMKTASKTAGLEEKSTACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFGVRVAAAESMPLLLECARVRGEYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIEVMGDGLHSIFSSYKEKVLPWFEQLLPLIVNLIPHRPWPDRQWGLCIFDDVIEHCEYFLRPMLQYVCD---NSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLEEAVQTFNYLCDLIESNHPIVLGPNNTNIAEGEMHEAIK |
7 | 6yvuA | 0.14 | 0.11 | 3.73 | 1.15 | FFAS-3D | | -----------------------------------------------------------------------------------------------------DPQFNAI----TGLN----GSGKS-NILDAICFVLGIASMVRASSLQDLIQSVLQLFQSNINNPNFLIMQGKITKILSLIEEAAGTK------MFEDRREKAERTMSKKETKLQENRTLLTEKLEKLRNEKRMFLEDLEKTERIVSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEEQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDRRVTNLEFNYTKPYPNFEASFVIRYATALQTCAGGRLFNVVVQDLERGRLRKRVTIIPLDKIYTRPISSQVLDLAKKIAPGKVELAINLIRFDESITKAMEFIFQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECENEIKTKQMSLKKCQE--------------------- |
8 | 7abhu | 0.09 | 0.09 | 3.44 | 1.13 | SPARKS-K | | LPPPAGYV-----PIRTPARKLTATPTPLGNLPFLKPDDIQYVDVDESEEQKERKIMKLLLKIKNGTMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRHKILVVIEPLLIDEDYYARVEGREIISNLAKAMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKKSWQARHTGIKIVQQIAILMGCAILEQQKVRTISALAIAALAEAKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVVEANYIKTEILPPFFKHFWQHRMALNYRQLVDTTVELANKVEIISRIVDDLKDEAEQYRKMVMETIEKIMGNEEQLIDGILYAFQVVNALGKRVKPYLPQICGTVLWRLNNKDLISRTAVVMKTEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKGPHDVLATLLNNLKVQERQNRVEYRVPELNVQNGVLKSLSFLFEYIGEMGKDY---IYAVTPEDALMDRDLVHRQTASAVVQHMSLGCEDSLNHLLNYVWPNVFEHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHDVYWKIYNSIYIGSQDAYPRIYNDDKNTYIRYEL |
9 | 5yysA | 0.07 | 0.06 | 2.68 | 1.79 | MapAlign | | GYAPSGKILTPVPVFRWERGQHLGDKLHTLIASGDVYIRSEKPLQSIPEADVVCYGLWVDPSLATHHGVFASDRKHPEQLDFMLQKPSLAELESLSKTHLFLMDIGIWLSDRAVEILMKRSHKESSEELKYYDLYSDFGLALGTHPRIEDEEVNTLSVAILPLPGGEFYHYGTSKELISSTVQNKVYDQRRIMHRKVKPNPPLCAENADLWIEHIITGVPENDWSLAVPVPMGDKGFVARPYGLDDVFKGDLRDSKTTLTGIPSAGANLKRLYAQREEFRKGNWKALEKSVFYQLDLADAAEDFVRLGLDMPELLPEDALQMSRIHNRMLRARILKLDGKDYRPEEQAAFDLLRDGLLGQPPLQVYVKPCKDFHIVLRSIDMGAMEIVSTFDELQDYKKIGSPFSIPKAALSFSAVSYASLEEQLKDFGAGIEVTLLAAIPAGSGLGTSSILASTVL-----------------GAINDFCGLAWDKNEICQRTLVLEQLLTTGGGWQDQYGGVLQGVKLLQ---------------TEAGFAQSPLVRWLPDHLFTHPEYKDCHLLYYTGITRTAKGILAEIVS----SMFLNSSLHLNLLSEMKAHALDMNEAIQRGSFVEFGRLVGKTWEQNKLDSGAVEAIIDLIKDYTLGYKLPGAGGGGYLYMVA |
10 | 4kvmA | 0.08 | 0.07 | 2.86 | 1.30 | EigenThreader | | SPKEITLFRTALKCYETKQYKKGLKAIEPLLERHPEHGESLAIKGIGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNRQYKAL-----ADTRNALLQDNPGVRANWSALAVAQFLRGEYASAYKIVDAFEST------INQGVPVDTQEESEAMLFMNLVILKKD-------GVEDAYKHLLSIEKKVLLETRAEYELYLSKMEEAKSTIYLLLDRN----PDNHQYYYNLQRAYGYEVLDSAEWLNLYSQL----------------AKRYPKSECPTRLPLEKLEGDEFLTHVDLYLRKKLKRFVDVKSLYKDTKKCKVVEDLVSKYASLLWTYYFLAQHFDHVGKAEKYVDLAIDHTELFMTKARISKHKGQTAMEIMDHARKLFINGKCAKYMLRNDENELAAKTVSAVGDLADMQCLWYMLEDGKSFARQKKLALKRFSTVFKIFDTWADDQFDFHFFAFRKGYLDLMSWED----------SVYDDPSFREAAQGSIEIYFALFDLPFAKYSPKLPDFEKLSSGEINEEEEKKIYKKLKKDLSKRLERAEKLKEADKSRKYDEDPLGENLVATSEPLKEAQKCLEKLLYGDKNPSAYILAAQLYTRLTASKYLEQAKVILGQNDPTVISTEKFYNSIKTQSN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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