>P53801 (180 residues) MAPGVARGPTPYWRLRLGGAALLLLLIPVAAAQEPPGAACSQNTNKTCEECLKNVSCLWC NTNKACLDYPVTSVLPPASLCKLSSARWGVCWVNFEALIITMSVVGGTLLLGIAICCCCC CRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MAPGVARGPTPYWRLRLGGAALLLLLIPVAAAQEPPGAACSQNTNKTCEECLKNVSCLWCNTNKACLDYPVTSVLPPASLCKLSSARWGVCWVNFEALIITMSVVGGTLLLGIAICCCCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN |
Prediction | CCCCCCCCCCCSHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCSSSCCCCCCSSSCCCCCSCCCCCCCCCCCCSSSSSSSCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC |
Confidence | 998655677641126889999999981445788999998623327976886599862532899824666767725882359820236877740312056789999999999999982111245666773157899999999999899987658999999999961889999975334689 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MAPGVARGPTPYWRLRLGGAALLLLLIPVAAAQEPPGAACSQNTNKTCEECLKNVSCLWCNTNKACLDYPVTSVLPPASLCKLSSARWGVCWVNFEALIITMSVVGGTLLLGIAICCCCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN |
Prediction | 744444433333133321111111011223444455655145434530451174340010246530361315421225650535403012033313100112233112223332100000012346654546455355545644454664456354435412642313657432543578 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCSHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCSSSCCCCCCSSSCCCCCSCCCCCCCCCCCCSSSSSSSCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC MAPGVARGPTPYWRLRLGGAALLLLLIPVAAAQEPPGAACSQNTNKTCEECLKNVSCLWCNTNKACLDYPVTSVLPPASLCKLSSARWGVCWVNFEALIITMSVVGGTLLLGIAICCCCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN | |||||||||||||||||||
1 | 6yz0A2 | 0.10 | 0.08 | 2.92 | 0.44 | CEthreader | -----IPTMRRVVQGMLLALPGVGSVAALLTVVFAAVMATNLYGATFPEWFGDLSKSLYT------LFQVMTLESWSMGIVRPVMNVHPNAWVFFIPFIMLTTLTVLNLFIGIIVDAMAITKEQEEEAKTGHHQEPISQTLLHLGDRLDRIEKQLAQN---------------------- | |||||||||||||
2 | 4o5pA | 0.06 | 0.06 | 2.43 | 0.60 | EigenThreader | KLKELEEKLRQRQNSAAEARAFANWLQELTRVSDADGTVAAVGHDWAD-----DTRLLVSCHSFPLDSIRNGRRTGPG---VHSDVGGGYEFLLSQIALQHQKAWEALHKRRSREYAAAQQ-----LPPSAAEQAEWDRNVALILLGAAAEFAHDYKGEDEAEEYSQIHRDGSARYHQLF | |||||||||||||
3 | 6ytkA | 0.11 | 0.09 | 3.38 | 0.60 | FFAS-3D | -------------IAPLTWLAVTLLYYECAASEFASVDHYPMFDNVSASKREEILAGFPCCRSA------------PSDVILVRDE--IALLHRYQSQMLGWILITLATIAALVSCCVAKCCSPLT-SLQHCYWTSHLQNERELFEQAAEQHSRLLMMHRIKKLFGFIPGSEDVKHIR-- | |||||||||||||
4 | 6b3rA1 | 0.15 | 0.14 | 4.65 | 0.83 | SPARKS-K | QKD--TRAQLVLWDCLILYNVTVIISKNMLSLLSCVFVEQMQSNFC----WVIQLFSLVCTVK---GYYDPKEMMTRDRDC---------LLPVEEAGIIWDSICFFFLLLQRRIFYFLHVSAQASRGFALYNAANLKSINFHRQIEEKSLAQLKRQMKRIRAKQEKYRQSQASHMMQRV | |||||||||||||
5 | 6f34A | 0.14 | 0.06 | 1.89 | 0.73 | CNFpred | -----------VLSFILSGLACVFAALCYAE---------------------------------FASTVPV----------SGSAYTYSYATFELIAWILGWDLILEYGVASSAVAVGWSGYFQG------------------------------------------------------- | |||||||||||||
6 | 5j44A | 0.07 | 0.06 | 2.33 | 0.83 | DEthreader | ---K--AGGLNSYGQMIGVTTDFLGQQPQNDFDK---KYDAANG------KKGDLGKN--VLQ-NSVNQGGYLQF-YRVSAL-GQTWMGGGDNLVNGLAFSVVPILLFIVTLLVNIITKLKLDINATLAYVNSSTGATEGISDIGSITSEALLQVLVTKLITAPKGSD------------ | |||||||||||||
7 | 1t3tA2 | 0.09 | 0.09 | 3.40 | 0.95 | MapAlign | FGKPERIVTALDIMTEGPLGGAAFNNEFLDSYYGEAMSIGERAARLAVGEALTNIKLSANPLSLVISAFALTPQLSTEDNALLLLAWEELGGVIQVRAEDRDAVEARTTLRVWWAETTWQMQRLRVLGAGEGWAKSILFNHRVRDEFETFFHHLAALESKGLVALRYVDNFGKVTETYPA | |||||||||||||
8 | 1f6gA | 0.11 | 0.09 | 3.21 | 0.56 | MUSTER | LLLGRHGSALHWAAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPAAL-----WWSVET-------ATTVGYGDLYPVTLWGR----------CVAVVVMVAGITSFGLVTAA------ATWFVGREQERRGHFVRHSEKAAEEAYTRTTRALHERFDRLERMLDDNRR------- | |||||||||||||
9 | 1kilE | 0.28 | 0.06 | 1.87 | 0.88 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------KKEEERQELRQAEEERKAKYAKMEAEREVMRQGIRDKYGI------------- | |||||||||||||
10 | 2zxoA3 | 0.09 | 0.06 | 2.31 | 0.44 | CEthreader | DAAEAQALVGELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEASRILEATLRPVFLVAQGKGTVRSLAPISAVEALLLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFPDP------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |