Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSCCSSSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQTSETADNDNASSFTM |
1 | 4n6hA | 0.25 | 0.20 | 6.31 | 1.17 | DEthreader | | ------------------AAALDAQKAFRIQYLGPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFR--TPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQF-P-SPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLV--D--IDRRD-PLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCR-K-----------------------------------PCG-- |
2 | 6wwzR | 1.00 | 0.83 | 23.21 | 2.14 | SPARKS-K | | --------------------------YSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWC-------------------------------------- |
3 | 4n6hA | 0.24 | 0.21 | 6.42 | 0.61 | MapAlign | | ALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFR--TPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQF--PSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL------VDIDRRPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCR------------------------------------------ |
4 | 4n6hA | 0.24 | 0.21 | 6.43 | 0.36 | CEthreader | | ALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFR--TPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQF--PSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLV-----DIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG-------------------------------------- |
5 | 5wb1A | 0.29 | 0.26 | 7.80 | 1.53 | MUSTER | | ----------------------------------PCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-HNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYM------RYRPVKQACLFSIFWWIFAVIIAIPHFMVVTK----KDNQCMTDY--DYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFRLVPRGPRGSQVQLVESGGGLVRPGGSLRLSCAASGSIFT |
6 | 6kp6A | 0.19 | 0.14 | 4.41 | 1.32 | HHsearch | | ------------------------------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTT--KMAALMIAAAWVLSFVLWAPAILFWQFVVGVPDNQCFAQFLS-------NPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSC---------IPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ---------------------------------------- |
7 | 6wwzR | 1.00 | 0.83 | 23.21 | 3.50 | FFAS-3D | | --------------------------YSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWC-------------------------------------- |
8 | 6wwzR | 0.95 | 0.78 | 21.75 | 1.03 | EigenThreader | | ------------------------YSVDSEMLLCSLQE--VRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFNTQ----GSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWC-------------------------------------- |
9 | 4n6hA | 0.27 | 0.20 | 6.24 | 1.69 | CNFpred | | -------------------------------------------ALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF--RTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFP--SPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSV-DRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRD-----PLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG-------------------------------------- |
10 | 4n6hA2 | 0.26 | 0.20 | 6.27 | 1.17 | DEthreader | | --------------------------------S-PGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFR--TPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQF-P-SPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLV----DIDRRD-PLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC-RK-----------------------------------PCG-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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