>P51659 (248 residues) MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE EIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIH RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI EGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVG AGWIGKLR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR |
Prediction | CCCCCCCCCCSSSSSCCCCHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHCCCCSSSSCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCSSSSSCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSSSSCCCCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCSSSSCCCSSSSCC |
Confidence | 99975669979999299864889999999990993999669987678777858999999999985998999569999999999999998199979996897554322321999999999999615668888999999999589729996654435588731889999999999999999985333945889567651244300489889864997787888877616676788838998572777539 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR |
Prediction | 87561507410000011132102000230174203000000245453444446204400520473404010211316203400530175245000000001022332045045621440140003000200110041036452000000002103410320000000011012002000412263401000000001123046323771265041530020000000450412111010211200437 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCSSSSSCCCCHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHCCCCSSSSCCCCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCSSSSSCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSSSSCCCCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCSSSSCCCSSSSCC MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR | |||||||||||||||||||
1 | 3t7cA | 0.25 | 0.24 | 7.52 | 1.50 | DEthreader | --MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLVKLPMSTDDLAETVRQVEALGRRIASQVDDFDAMQAAVDDGVTQLGRLDIVLANAALASGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVTPMLLTYFFQVRIPYVEPADISNAILFLVSDDAYITGVSLPVDGGAL-LK- | |||||||||||||
2 | 2et6A | 0.55 | 0.52 | 14.99 | 1.55 | SPARKS-K | --SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLK-----------AADVVVDEIVKNGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIR | |||||||||||||
3 | 4ureA | 0.33 | 0.30 | 9.09 | 0.42 | MapAlign | ----MLLEGKTALVTGAGNGIGRTIALTYAAEGANVVVSDI---------SDEWGRETLALIEGKGGKAVFATAHPEDHDELIAAAKRAFGRLDIACNNAGISGFTPTAETTDAQWQRVIGINLSGVFYGVRAQIRAMLETGGGAIVNISSIAGQIGIEGITPYTAAKHGVVGLTKTVAWEYGSKGIRINSVGPAFITTLVEQMHALRRL--GETEEVANLVAWLSSDKASVTGSYYAVDGGYL---- | |||||||||||||
4 | 4ureA | 0.33 | 0.31 | 9.32 | 0.25 | CEthreader | ----MLLEGKTALVTGAGNGIGRTIALTYAAEGANVVVSD---------ISDEWGRETLALIEGKGGKAVFQTAHPEDHDELIAAAKRAFGRLDIACNNAGISGFTPTAETTDAQWQRVIGINLSGVFYGVRAQIRAMLETGGGAIVNISSIAGQIGIEGITPYTAAKHGVVGLTKTVAWEYGSKGIRINSVGPAFINTTLVQNVPHALRRLGETEEVANLVAWLSSDKASVTGSYYAVDGGYLAR-- | |||||||||||||
5 | 2et6A | 0.55 | 0.52 | 14.99 | 1.39 | MUSTER | --SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDL-----------KAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIR | |||||||||||||
6 | 2et6A | 0.48 | 0.44 | 12.79 | 0.66 | HHsearch | GAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD-------A----TKTVDEIKAAGGEAWDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMK---------NLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTR | |||||||||||||
7 | 2et6A1 | 0.55 | 0.52 | 14.99 | 2.54 | FFAS-3D | --SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLK-----------AADVVVDEIVKNGGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIR | |||||||||||||
8 | 5g4kA | 0.20 | 0.19 | 6.07 | 0.53 | EigenThreader | VNVKFSVKGKVALVTGATGALGCVLSKAYGYAGAKVFMTGRN---------EKKLQALEAEFKAEGIDCAYVADPAAQVDAMITACVAQYGEVNILAVTHGFNKPQNILEQSVADWQYIMDTDCKSVYVVCKYVAQQMVDQGGGKIVVVTSQRSKRGMAGYTGYCTSKGGADLMVSSMACDLSKYGINVNSICPTVFRSDLTEWMFDNFLKLAEPEDFVGYALFLSSDASNITGANCDCSGGYL--TC | |||||||||||||
9 | 1zbqA | 1.00 | 0.99 | 27.77 | 2.03 | CNFpred | --SPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR | |||||||||||||
10 | 3s55A | 0.30 | 0.30 | 9.04 | 1.50 | DEthreader | ----ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDGYPLATDDLAETVALVEKTGRRCISKVDDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNITPMTHFVESFAYAPFLKPEEVTRAVLFLVDEASSITGTVLPIDAGATARMI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |