>P51451 (221 residues) MGLVSSKKPDKEKPIKEKDKGQWSPLKVSAQDKDAPPLPPLVVFNHLTPPPPDEHLDEDK HFVVALYDYTAMNDRDLQMLKGEKLQVLKGTGDWWLARSLVTGREGYVPSNFVARVESLE MERWFFRSQGRKEAERQLLAPINKAGSFLIRESETNKGAFSLSVKDVTTQGELIKHYKIR CLDEGGYYISPRITFPSLQALVQHYSKKGDGLCQRLTLPCV |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MGLVSSKKPDKEKPIKEKDKGQWSPLKVSAQDKDAPPLPPLVVFNHLTPPPPDEHLDEDKHFVVALYDYTAMNDRDLQMLKGEKLQVLKGTGDWWLARSLVTGREGYVPSNFVARVESLEMERWFFRSQGRKEAERQLLAPINKAGSFLIRESETNKGAFSLSVKDVTTQGELIKHYKIRCLDEGGYYISPRITFPSLQALVQHYSKKGDGLCQRLTLPCV |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCSSCCCCCCCCCSSSSSSSCCCCCCCSSSSSSSSCCCCCSSSCCCCCSCCHHHHHHHHHHCCCCCCSCCCCCCC |
Confidence | 98766789887787777777888987777777888999986777888999998777888718999015489898877707991999973589845825437994444213444443433221112345565789999863288887523203568997289999753677764045789986899689649721199999999986467998240786679 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MGLVSSKKPDKEKPIKEKDKGQWSPLKVSAQDKDAPPLPPLVVFNHLTPPPPDEHLDEDKHFVVALYDYTAMNDRDLQMLKGEKLQVLKGTGDWWLARSLVTGREGYVPSNFVARVESLEMERWFFRSQGRKEAERQLLAPINKAGSFLIRESETNKGAFSLSVKDVTTQGELIKHYKIRCLDEGGYYISPRITFPSLQALVQHYSKKGDGLCQRLTLPCV |
Prediction | 73214136567552455655454444534466564444354444754444435554765431010001062657630304441303003534320212334444322233433333433333333343144542342034343430132244455332100010223454443122020333762202036534172043005103644520213044207 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCSSCCCCCCCCCSSSSSSSCCCCCCCSSSSSSSSCCCCCSSSCCCCCSCCHHHHHHHHHHCCCCCCSCCCCCCC MGLVSSKKPDKEKPIKEKDKGQWSPLKVSAQDKDAPPLPPLVVFNHLTPPPPDEHLDEDKHFVVALYDYTAMNDRDLQMLKGEKLQVLKGTGDWWLARSLVTGREGYVPSNFVARVESLEMERWFFRSQGRKEAERQLLAPINKAGSFLIRESETNKGAFSLSVKDVTTQGELIKHYKIRCLDEGGYYISPRITFPSLQALVQHYSKKGDGLCQRLTLPCV | |||||||||||||||||||
1 | 2ptkA | 0.49 | 0.32 | 9.33 | 0.83 | DEthreader | -----------------------------------------------------------VTTFVAL----------TDLSFKGERLQI-VN-T--LAHSLTTGQTGYI---YVAPSDSIQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP | |||||||||||||
2 | 1lckA | 0.59 | 0.43 | 12.46 | 2.69 | SPARKS-K | -----------------------------------------------------------DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQ | |||||||||||||
3 | 2ptkA | 0.54 | 0.39 | 11.36 | 1.11 | MapAlign | ------------------------------------------------------------TTFVALYDYESRTETDLSFKKGERLQIVNNEGDWWLAHSLTTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP | |||||||||||||
4 | 2ptkA | 0.54 | 0.39 | 11.36 | 0.74 | CEthreader | -----------------------------------------------------------VTTFVALYDYESRTETDLSFKKGERLQIVNNEGDWWLAHSLTTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP | |||||||||||||
5 | 1qcfA | 0.60 | 0.45 | 12.84 | 1.78 | MUSTER | --------------------------------------------------------SGIRIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
6 | 1qcfA | 0.60 | 0.45 | 12.84 | 1.85 | HHsearch | --------------------------------------------------------SGIRIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
7 | 1lckA | 0.60 | 0.43 | 12.46 | 2.24 | FFAS-3D | -----------------------------------------------------------DNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPC- | |||||||||||||
8 | 1qcfA | 0.60 | 0.44 | 12.59 | 1.10 | EigenThreader | --------------------------------------------------------SGIRIIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRYDPRQ--GVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
9 | 3nhnA | 0.61 | 0.45 | 12.82 | 3.55 | CNFpred | ------------------------------------------------------------IIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKLSVPCM | |||||||||||||
10 | 2ptkA1 | 0.50 | 0.31 | 9.05 | 0.83 | DEthreader | ------------------------------------------------------------VTTFVA----------TDLSFKERLQI--V------AHSLTTGQTG------VAPSDSIQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |