Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSCCCCCCCCCCCCHHHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSCCCCCCCHHHCCCCCSSSSSSSCCCSSSSSSSCCCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCC ELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKR |
1 | 3ko1A | 0.32 | 0.31 | 9.25 | 1.50 | DEthreader | | SINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPMPKRLENAKIALIDASLEVEKP-ELDAEIRINDPQMQKFLDEEENLIKEKVDKILATGANVIICQ-K----GIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVG-EDKMVFVEGAKNP-KSISILIRGGLERLVDETERALRDALGTVADVIKDG |
2 | 3p9dG2 | 0.24 | 0.23 | 7.09 | 2.54 | SPARKS-K | | -DITSELLERCARTAMSSKLIHNNADFFVKMCVDAVLSL----DRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLP-----IGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQ-IGSERYNLFQGCP-QAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNK |
3 | 1a6eB | 0.32 | 0.31 | 9.46 | 1.24 | MapAlign | | -IGEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAERDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKG-----IDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVG-EDYMTFVTGCKN-PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDG |
4 | 1a6eB | 0.33 | 0.32 | 9.56 | 0.72 | CEthreader | | GADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGI-----DDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVG-EDYMTFVTGCKNPK-AVSILVRGETEHVVDEMERSITDSLHVVASALEDG |
5 | 1q3rA | 0.35 | 0.34 | 10.28 | 2.07 | MUSTER | | DPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGI-----DDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKL-AGENMIFVEGCKN-PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDG |
6 | 3p9dG2 | 0.24 | 0.23 | 7.19 | 1.95 | HHsearch | | -DITSELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR----NDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGQKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPI-----GDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQI-GSERYNLFQGCPQA-KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNK |
7 | 3p9dG2 | 0.23 | 0.22 | 6.78 | 2.67 | FFAS-3D | | DI-TSELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR----NDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPI-----GDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLF--QGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNK |
8 | 3p9dG2 | 0.24 | 0.22 | 6.98 | 1.65 | EigenThreader | | ITSEL--LERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR----NDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLP-----IGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQI-GSERYNLFQGCPQ-AKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNK |
9 | 1a6dB | 0.32 | 0.31 | 9.46 | 2.47 | CNFpred | | GADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQK-----GIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVG-EDYMTFVTGCKN-PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDG |
10 | 1a6eA | 0.33 | 0.32 | 9.56 | 1.50 | DEthreader | | KSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKG-----IDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKI-GDDRMTFVMGCKNP-KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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