>P50749 (326 residues) MDYSHQTSLVPCGQDKYISKNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISW GLRRPIRLQMQDDNERIRPPPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQ MPSSTDSRGLKPLQEDTPQLMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKT SVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGEKQKLKATDY PLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQEEEDREVKK LMRKYTVLRLMIRQRLEEIAETPATI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MDYSHQTSLVPCGQDKYISKNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERIRPPPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSRGLKPLQEDTPQLMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKYTVLRLMIRQRLEEIAETPATI |
Prediction | CCCCCCCCSSSSCCCCCCCHHHHHHHHHHHHHHCCCCCSSSSSSSCCCCSSSSSSSSSSSCSSCSSSSCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCSSSCCCCCCSSSSSSSCCCCHHHHHHHHHHHHCCCCCHHHSSSSSSSCCCCSSSCCCCCCCHHHHHHHCCCCCSSSSSSSSCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC |
Confidence | 98777887378368973169999999987654305873147763108906786243233130002552135787621477765556665556777665666666654556555556654566665555656555556544566776664416887771332144556677788766764215627999546999835887999999999974678886541689997577478579877668899973998430334555236678764356553125638999999999999999999999999999999999999601578889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MDYSHQTSLVPCGQDKYISKNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERIRPPPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSRGLKPLQEDTPQLMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKYTVLRLMIRQRLEEIAETPATI |
Prediction | 75524443204147543032630352044121215454230234447442103010301100310030325356441424434334544442435435435345454635546544557534454655445544534440313344523434442424453443564534444444453011011444033102021423043004101630314341640000113564552405643200000012033562020002335655503321342360413104200520464256205402520541153035105614746536 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCSSSSCCCCCCCHHHHHHHHHHHHHHCCCCCSSSSSSSCCCCSSSSSSSSSSSCSSCSSSSCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCHHHCCCCCCCCCCCCCCCCCCCSSSCCCCCCSSSSSSSCCCCHHHHHHHHHHHHCCCCCHHHSSSSSSSCCCCSSSCCCCCCCHHHHHHHCCCCCSSSSSSSSCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MDYSHQTSLVPCGQDKYISKNELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERIRPPPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSRGLKPLQEDTPQLMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKYTVLRLMIRQRLEEIAETPATI | |||||||||||||||||||
1 | 7byjA | 0.11 | 0.05 | 1.88 | 0.44 | CEthreader | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNSLLFMPNVLKVYLENGQTKSFRFDCSTSIKDVILTLQEKLSIK-GIEHFSLMLEQRTTKLLLLHEQET--LTQVTQRPSSHKMRCLFRISFVPKDPIDLLRRDPVAFEYLYVQSCNDVVQERFGPELKYDIALRLAALQMYIATVTTKQTQKIS | |||||||||||||
2 | 3p9dB | 0.08 | 0.06 | 2.54 | 0.63 | EigenThreader | GPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVGDGTTSVTIAKTTLSSKNAILRLKGSTNLEHIQIIKILGGKLSGFILAKKFGNNQPKRIENAANTTLDTDKVKIFGTKFKVDSIEHADFEGVERLALVTGGEVVSTFDEPSK----CKLGECDVIEPFLKFSGCKACTIVLRSLHDALS--------VLSQTTKE-----TRTVLGGGVEAFARALRQLPTILADNAGSIYNGISTS-----GESYKLKRAVVSSASEAAEVLLRVDR------------------------------------------ | |||||||||||||
3 | 3ddcB | 0.31 | 0.12 | 3.71 | 0.68 | FFAS-3D | ------------------TIQEIKQKIDSYN-SREKHCLGMKLSEDGT---YTGFIKVHLKLRRPVTV---------------------------------------------------------------------------------------------------------------PSFYLP-LDAIKQMHISSTTTVSEVIQGLLDKFMVVDNPQKFALFRIHKDGQFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN---------------------------------------------------------------- | |||||||||||||
4 | 3ddcB | 0.25 | 0.09 | 2.66 | 0.68 | SPARKS-K | ------------------------------------------------------------------------------------------------------------------------------------------------------PPTIQEIKQKIDSYNSREGTYTGFHLKLRRPVFYLPLDAIKQMHISSTTTVSEVIQGLLDKFMVVDNPQKFALFKRIHKDLFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN---------------------------------------------------------------- | |||||||||||||
5 | 3ddcB | 0.28 | 0.11 | 3.46 | 0.79 | CNFpred | ----------------PPTIQEIKQKIDSYNSREK-HCLGMKLSE---DGTYTGFIKVHLKLRRPVTVP---------------------------------------------------------------------------------------------------------------SFYLPL-DAIKQMHISSTTTVSEVIQGLLDKFMVVDNPQKFALFKRIHKVLFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN---------------------------------------------------------------- | |||||||||||||
6 | 5ifeA | 0.05 | 0.04 | 1.81 | 0.67 | DEthreader | CPP--FFFLAQTEQGDIFKFDTVAAAMCFVASEF----GNHYLYQIANLVLDEDSLPILFCQALAYLR--SE-AVSTVEEVDSGDLIRAVRMDGQLNEYTE--PSD---------------SMQALPQPGLLTLAMSSRSLSYETLEFASG--FASECPEGIILALEKAVF---NQ----V-----------AF---------PLQYTP--FVIH-----IIETDH------NAYTEKNPESIFGAPKA------WASVIQLENEAAFSAIISGSDVQESYPRWVGNCNYSPVKNVIDGLCE-FQNVSEEDRTP------------ | |||||||||||||
7 | 3ddcB | 0.24 | 0.10 | 2.96 | 0.84 | MapAlign | -----------------PTIQEIKQKIDSYNSREKH-CLGMKLS---EDGTYTGFIKVHLKL--RRPV------------------------------------------------------------------------------------------------------------TVPSFYLPL--DAIKQMHISSTTTVSEVIQGLLDKFMVVDNPQKFALFKRIHKVLFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN---------------------------------------------------------------- | |||||||||||||
8 | 3ddcB | 0.29 | 0.12 | 3.55 | 0.55 | MUSTER | ----------------PPTIQEIKQKIDSYNSREKH-CLGMKLS-EDGT--YTGFIKVHLKLRRPV---------------------------------------------------------------------------------------------------------------TVPSFYLP-LDAIKQMHISSTTTVSEVIQGLLDKFMVVDNPQKFALFKRIHDGQFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN---------------------------------------------------------------- | |||||||||||||
9 | 3ddcB | 0.30 | 0.12 | 3.63 | 3.26 | HHsearch | ----------------PPTIQEIKQKIDSYNSREKHC-LGMKLS-EDG--TYTGFIKVHLKLRRPVTVP---------------------------------------------------------------------------------------------------------------SFYLP-LDAIKQMHISSTTTVSEVIQGLLDKFMVVDNPQKFALFKIHKDGQFQKLSIADYPLYLRLLAGPDTDVLSFVLKEN---------------------------------------------------------------- | |||||||||||||
10 | 1vt4I3 | 0.05 | 0.05 | 2.24 | 0.44 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |