>P50453 (376 residues) METLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLLGAKGNTATQMAQALSL NTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLSTFKESCLQFYHAELKELS FIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVNAIYFKGKWNEPFDETYT REMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYARKELSLLVLLPDDGVELS TVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDMESVLRHLGIVDAFQQGKADL SAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCMESGPRFCADHPFLFFIR HNRANSILFCGRFSSP |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | METLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLLGAKGNTATQMAQALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLSTFKESCLQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVNAIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYARKELSLLVLLPDDGVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDMESVLRHLGIVDAFQQGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCMESGPRFCADHPFLFFIRHNRANSILFCGRFSSP |
Prediction | CHHHHHHHHHHHHHHHHHHHHHCCCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCSSSSSSSSSSSCCCCCCHHHHHHHHHHHCCSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCHHHCCCCCCSSCCCCSSSSSCCCCCCCCCCSSCCCCCSSSSSSSCCCCCSSSSSSSCCCCCCHHHHHHHCCHHHHHHHHHHHCCSSSSSSSSCCCSSSSSSSCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSSCCCCSSSCCSCSSSSSCCCCCCCCCSSSSCCCSSSSSSSCCCCCSSSSSSSCCC |
Confidence | 5689999999999999999971999859994599999999999705561689999972999716999999999999971799926879849998288886889999999986973686277754489999999999987069865679977799553135564337832003999944383468454389218976343125545336079984999982789939999996698997789998639879999862323826679995464799865143999998199523799999866777888734634888999998488513101010232013568999689963877999998899978999785089 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | METLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLLGAKGNTATQMAQALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLSTFKESCLQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVNAIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYARKELSLLVLLPDDGVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDMESVLRHLGIVDAFQQGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCMESGPRFCADHPFLFFIRHNRANSILFCGRFSSP |
Prediction | 6540251014000400330066365300000020001000001100225045234503505444201500330042024345412031021111456150365015103611402023011352144015201510353044304612577403530100000000020204454347304643022264241201001132324202055030100102045430000000045344044115403363044014364044230301001030435140351047130540046641202200632302002020202010305214120112121233232453130100000000000351400000000237 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CHHHHHHHHHHHHHHHHHHHHHCCCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCSSSSSSSSSSSCCCCCCHHHHHHHHHHHCCSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCHHHCCCCCCSSCCCCSSSSSCCCCCCCCCCSSCCCCCSSSSSSSCCCCCSSSSSSSCCCCCCHHHHHHHCCHHHHHHHHHHHCCSSSSSSSSCCCSSSSSSSCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSSCCCCSSSCCSCSSSSSCCCCCCCCCSSSSCCCSSSSSSSCCCCCSSSSSSSCCC METLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLLGAKGNTATQMAQALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLSTFKESCLQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVNAIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYARKELSLLVLLPDDGVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDMESVLRHLGIVDAFQQGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCMESGPRFCADHPFLFFIRHNRANSILFCGRFSSP | |||||||||||||||||||
1 | 2h4rA | 0.44 | 0.43 | 12.45 | 1.50 | DEthreader | MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDDIKGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTT-NADFRGMTDKKDLAISKVIHQSFVAVDEKGTE------AAA--------VLKFKVDHPFHFFIRHNKSKTILFFGRFCCP | |||||||||||||
2 | 2vdxA | 0.35 | 0.34 | 10.08 | 3.17 | SPARKS-K | --GLASANVDFAFSLYKHLVALSPKKNIFISPVSISMALAMLSLGTCGHTRAQLLQGLGFNSETEIHQGFQHLHQLFAKSDTSLEMTMGNALFLDGSLELLESFSADIKHYYESEVLAMNF-QDWATASRQINSYVKNKTQGKIVDLFSG---DSPAILVLVNYIFFKGTWTQPFDLASTREENFYVDETTVVKVPMMLQSSTISYLHDSELPCQLVQMNYVGN-GTVFFILPDKG-KMNTVIAALSRDTINRWSAGL--TSSQVDLYIPKVTISGVYDLGDVLEEMGIADLFTTQ-ANFSRITQDAQLKSSKVVHKAVLQLNEEGTEAAGAMFLEAIPR----KPIILRFNQPFIIMIFDHFTWSSLFLARVMNP | |||||||||||||
3 | 6cj7A | 0.29 | 0.27 | 8.33 | 1.13 | MapAlign | ----GPASTSFGVNVFKQMA-TEQSGNLAASPFSITILLAMLQQGAAGNTLDEITRALQMT-PEKSAEIFKKVNEEIQKRNSRNILKTANNVFLSENFNLNPQFKRIAVNNFDSDLTPTYFG-KPALAAQNINSWIASKTNDKIDKLVSPDDLSGNTQMVMVNAVYFKGLWEIPFREQATQKRNFTLNGGEKKVASFMQTRRYFKAGTHKPAMAKVVVLPFEYNEYSLIVVLPLKSSNVDALLSSLSMEDVASFL---DLPPKDVALELPKFSIKADINLEPVLNKMGVSSIFTQ-QAELYNLGSHLSPQVSSALHSAVLTIDERGG---------------DEPSLYFRANKPFLAILWDNRSSIPLFMARIMDP | |||||||||||||
4 | 6cj7A | 0.29 | 0.27 | 8.33 | 0.61 | CEthreader | ----GPASTSFGVNVFKQMATE-QSGNLAASPFSITILLAMLQQGAAGNTLDEITRALQM-TPEKSAEIFKKVNEEIQKRNSRNILKTANNVFLSENFNLNPQFKRIAVNNFDSDLTPTYFGK-PALAAQNINSWIASKTNDKIDKLVSPDDLSGNTQMVMVNAVYFKGLWEIPFREQATQKRNFTLNGGEKKVASFMQTRRYFKAGTHKPAMAKVVVLPFEYNEYSLIVVLPLKSSNVDALLSSLSMEDVASFLD---LPPKDVALELPKFSIKADINLEPVLNKMGVSSIFTQQ-AELYNLGSHGSPQVSSALHSAVLTIDERGGDE---------------PSLYFRANKPFLAILWDNRSSIPLFMARIMDP | |||||||||||||
5 | 2zv6B | 0.47 | 0.46 | 13.41 | 2.56 | MUSTER | SNSLSEANTKFMFDLFQQFRKS-KENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQ---VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKDLSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFN-GDADLSGMTGSRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSPTSTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP | |||||||||||||
6 | 1ovaD | 0.38 | 0.38 | 11.11 | 1.80 | HHsearch | -GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKSVNVHSSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKAFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSS-SANLSGISSAESLKISQAVHAAHAEINEAGREVVGSAEAGVDA-ASV--SEEFRADHPFLFCIKHIATNAVLFFGRCVSP | |||||||||||||
7 | 1xu8B | 0.35 | 0.35 | 10.31 | 4.09 | FFAS-3D | MDALQLANSAFAVDLFKQLCEKEPLGNVLFSPICLSTSLSLAQVGAKGDTANEIGQVLHFENVKDVPFGFQTVTSDVNKLSSFYSLKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQINNSIKDLTDGHFENILADNSVNDQTKILVVNAAYFVGKWMKKFPESETKECPFRLNKTDTKPVQMMNMEATFCMGNIDSINCKIIELPFQNKHLSMFILLPKDVEDESTGLEKINSESLSQWTNPSTMANAKVKLSIPKFKVEKMIDPKACLENLGLKHIFSEDTSDFSGMSETKGVALSNVIHKVCLEITEDGGDVPGAR--------ILQHKDELNADHPFIYIIRHNKTRNIIFFGKFCSP | |||||||||||||
8 | 1ovaD | 0.34 | 0.33 | 9.94 | 1.55 | EigenThreader | GS-IGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDKDSIEAQSLRDILNQITKPNDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEFKDED---TQAMPFRVTEQKPVQ-MMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLESIINFEKLTEWT-SSNVMEERKIKVYLPRMMEEKYNLTSVLMAMGITDV-FSSSANLSGISSAESLKISQAVHAAHAEINEAGVGSAEAGVD------AASVSEEFRADHPFLFCIKHIATNAVLFFGRCVSP | |||||||||||||
9 | 1jtiA | 0.39 | 0.38 | 11.17 | 3.55 | CNFpred | -GSIGAASMEFCFDVFKELKVHHANENIFYCPIAIMSALAMVYLGAKDSTRTQINKVVRFDK-VNVHSSLRDILNQITK-NDVYSFSLASRLYAEERYPILPEYLQCVKELYRGGLEPINFQTAADQARELINSWVESQTNGIIRNVLQPSSVDSQTAMVLVNAIVFKGLWEKTFKDEDTQAMPFRVTEQESKPVQMMYQIGLFRVASMASEKMKILELPFASGTMSMLVLLPDEVSGLEQLESIINFEKLTEWTSSNVMEERKIKVYLPRMKMEEKYNLTSVLMAMGITDVFSS-SANLSGISSAESLKISQAVHAAHAEINEAGTEVVGSAEAGVDAA------EEFRADHPFLFCIKHIATNAVLFFGRCVSP | |||||||||||||
10 | 2zv6B | 0.47 | 0.45 | 13.17 | 1.50 | DEthreader | SNSLSEANTKFMFDLFQQFRKSK-ENNIFYSPISITSALGMVLLGAKDNTAQQIKKVLHFDQ---VHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKDLSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFN-GDADLSGMTGSRGLVLSGVLHKAFVEVTEEGA---------EAAAAVVGSNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |