>P50148 (240 residues) MTLESIMACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMR IIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVL VESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQ RDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MTLESIMACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV |
Prediction | CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCSSSSSSCCCSSSSSSSCCCCHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCSSSSCCCCCCHHHHCCCCCCCSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSSSSSSSSCHHHHHHHHHHHHHHHHHHHHHHCCC |
Confidence | 986565666689678999998199999999999977756765532578778870124440232344322124554217734799955873222145799846997689975335545553012431169999999999982987748966997065310687626465200266568899779999999999999736678983899985666062799999999999999999982899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MTLESIMACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV |
Prediction | 651431001021564551453165025303651553452031113444400321004323434334333333233304613120111424543243024004404101000200333220122334411420250034006373046000000023342155305444055134416444221420141035204512636724000000002127104300510230012400563607 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCSSSSSSCCCSSSSSSSCCCCHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCSSSSCCCCCCHHHHCCCCCCCSCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSSSSSSSSCHHHHHHHHHHHHHHHHHHHHHHCCC MTLESIMACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV | |||||||||||||||||||
1 | 2rgnA | 0.93 | 0.79 | 22.23 | 1.17 | DEthreader | ---------------------------------RS-RRELKLLLLGTGESGKSTFIKQMRIGSYDGVPTIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYQVLVE-SDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYN-L | |||||||||||||
2 | 2rgnA2 | 0.99 | 0.85 | 23.69 | 1.50 | SPARKS-K | ----------------------------------RSRRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNL- | |||||||||||||
3 | 1tndA | 0.55 | 0.45 | 12.85 | 0.50 | MapAlign | ------------------------------------ARTVKLLLLGAGESGKSTIVKQMKHQLRSRVKTIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHLSICFPDYNGPN-TYEDAGNYIKVQFLELNMRRDVKIYSHMTCATDTQNVKFVFDAVTDIIIKLK------- | |||||||||||||
4 | 1tndA2 | 0.56 | 0.47 | 13.67 | 0.39 | CEthreader | ------------------------------------ARTVKLLLLGAGESGKSTIVKQMKIIHQDKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHLSICFPDYNGPN-TYEDAGNYIKVQFLELNMRRVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGL- | |||||||||||||
5 | 2rgnA2 | 0.99 | 0.85 | 23.69 | 1.47 | MUSTER | ----------------------------------RSRRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNL- | |||||||||||||
6 | 2rgnA | 0.99 | 0.85 | 23.69 | 1.03 | HHsearch | ----------------------------------RSRRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNL- | |||||||||||||
7 | 2rgnA2 | 0.99 | 0.85 | 23.69 | 2.37 | FFAS-3D | ----------------------------------RSRRELKLLLLGTGESGKSTFIKQMRIIHGSGYTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNL- | |||||||||||||
8 | 7ad3E | 0.44 | 0.39 | 11.35 | 0.77 | EigenThreader | TQT----IGDESDPFLQNKRANDVIEQSLQLEKQRDKNEIKLLLLGADNSGKSTVLKQLK-------TGITETEFNIGSSKFKVLDAGGQRSERKKWIHCFEGITAVLFVLDMS----------DYNRMHESIMLFDTLLNSKWFKDTPFILFLNKIDLFEEKVKSMPI--RKYFPDGRVGDAEAGLKYFEKIFLSL-NKTNKPIYVKRTCATDTQTAKFILSAVTDLIIQQNL---KKI | |||||||||||||
9 | 6oijA | 0.90 | 0.85 | 23.77 | 1.72 | CNFpred | --------CTLSAEDKAAVERSKMIDRNLREDGEKARRELKLLLLGTGESGKSTFIKQMRIIHG---TGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQV----DNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKEYNLV | |||||||||||||
10 | 2xtzA | 0.35 | 0.30 | 8.95 | 1.17 | DEthreader | --------------------------------GSG-IHIRKLLLLGAGESGKSTIFKQIKLQTFELYVTVVEIQFSPVGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYQTLF-EDEQKNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEKKVLDVPLNCEWFRDYQPEIAYEFVKKKFEELYYQNTAPVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLLEA--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |