>P50053 (170 residues) MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFM GSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDV SATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSV |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSV |
Prediction | CCCCCSSSSCCCSSSSSSSCCCCCCCCCSSSSCSSSSSCCCHHHHHHHHHHHHCCCSSSSSSSCCCHHHHHHHHHHHHHCCCCCCSSSSCCCCCCSSSSSSSCCCCCSSSSSSCCCCCCCCHHHHCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHCCCCCCCCCSSSSC |
Confidence | 99996999877538899971679999936851326881497699999999990998799997559879999999999919953373781898997799999879998799995897778997882487861799999928998999999999999687667788824449 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSV |
Prediction | 87523000000010100020252145634140541343221300000000131414020002024261043026305734041430343674521100000037614000000346235032630453206502000001331630140042027334644575604036 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCCCCSSSSCCCSSSSSSSCCCCCCCCCSSSSCSSSSSCCCHHHHHHHHHHHHCCCSSSSSSSCCCHHHHHHHHHHHHHCCCCCCSSSSCCCCCCSSSSSSSCCCCCSSSSSSCCCCCCCCHHHHCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHCCCCCCCCCSSSSC MEEKQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSV | |||||||||||||||||||
1 | 2fv7A | 0.16 | 0.15 | 5.08 | 1.50 | DEthreader | --VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNE-GQNIIVIVAGANLLLNTEDLRAANISRAKVMVCQLITPATSLEALTMARRSG------VKTLFNA | |||||||||||||
2 | 2hlzC1 | 0.78 | 0.75 | 21.29 | 1.63 | SPARKS-K | PRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFG--SAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKL-QRIDAHNTRQPPEQKIR--- | |||||||||||||
3 | 2fv7A | 0.16 | 0.15 | 4.91 | 0.89 | MapAlign | --VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNE-GQNIIVIVAGANLLLNTEDLRAAVISRAKVMVCQEITPATSLEALTMARRS-------GVKTLFN | |||||||||||||
4 | 2fv7A | 0.16 | 0.15 | 4.92 | 0.64 | CEthreader | --VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVN-NEGQNIIVIVAGANLLLNTEDLRAAAISRAKVMVCQEITPATSLEALTMARRSGV------KTLFNP | |||||||||||||
5 | 2hlzC1 | 0.75 | 0.72 | 20.50 | 1.78 | MUSTER | PRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFG--SAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRN-ASEQVKLQRIDAHNTRQPPEQKIR--- | |||||||||||||
6 | 2hlzC1 | 0.79 | 0.76 | 21.45 | 1.41 | HHsearch | PRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFG--SAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVK-LQRIDAHNTRQPPEQKIR--- | |||||||||||||
7 | 2hlzC1 | 0.74 | 0.71 | 20.18 | 2.00 | FFAS-3D | -RGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFGSAPGHV--ADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKLQR-IDAHNTRQPPEQKIR--- | |||||||||||||
8 | 2hlzC1 | 0.70 | 0.66 | 18.74 | 1.00 | EigenThreader | PRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFGSAPG--HVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKIDAHNTRQPPEQ----KIR--- | |||||||||||||
9 | 3nbvA | 0.99 | 0.98 | 27.35 | 2.10 | CNFpred | --GSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSV | |||||||||||||
10 | 2hlzC | 0.77 | 0.75 | 21.31 | 1.50 | DEthreader | PRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAF-GS-APGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVK-LQRIDAHNTRQPPKIRVSVEV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |